RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CHRNA3P32297 505 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 PBX1P40424 430 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 CTSKP43235 329 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 METAP1P53582 386 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 ARF5P84085 180 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 KLHL30Q0D2K2 578 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 CNTN1Q12860 1018 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 MAMLD1Q13495 774 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 ZNF423Q2M1K9 1284 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 KIF19Q2TAC6 998 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 PIP5KL1Q5T9C9 394 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 FAM72AQ5TYM5 149 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 E4F1Q66K89 784 aaPredicted RBP10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 FAM72DQ6L9T8 149 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 RWDD4Q6NW29 188 aaKnown RBP10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 LINGO4Q6UY18 593 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 DBX2Q6ZNG2 339 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 ZNF571Q7Z3V5 609 aaPredicted RBP10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 TMC6Q7Z403 805 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 ADAT2Q7Z6V5 191 aaKnown RBP10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 GLRX5Q86SX6 157 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 FAM72BQ86X60 149 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 RTL3Q8N8U3 475 aaKnown RBP10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 FNIP1Q8TF40 1166 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 SYN2Q92777 582 aaPredicted RBP10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 ARHGEF2Q92974 986 aaKnown RBP10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 TRIM11Q96F44 468 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 PPP1R16AQ96I34 528 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 SLC6A18Q96N87 628 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 NCAPGQ9BPX3 1015 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 HDAC8Q9BY41 377 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 HAUS4Q9H6D7 363 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 EBF2Q9HAK2 575 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 DYRK4Q9NR20 520 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 TM7SF3Q9NS93 570 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 DONSONQ9NYP3 566 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 TAS2R14Q9NYV8 317 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 IL36AQ9UHA7 158 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 FZD10Q9ULW2 581 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 HPCAL4Q9UM19 191 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 WASF3Q9UPY6 502 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 FNDC3AQ9Y2H6 1198 aaKnown RBP10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 SNX11Q9Y5W9 270 aa10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 SMG1Q96Q15 3661 aaKnown RBP10.62□□□□□ -0.71
PTCD2P1-201ENST00000554393 TBC1D3DA0A087WVF3 549 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 TBC1D3IA0A087WXS9 549 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 TBC1D3EA0A087X179 549 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 TBC1D3KA0A087X1G2 549 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 A0A1W2PR77 199 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 TBC1D3FA6NER0 549 aaPredicted RBP10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 WASH4PA8MWX3 477 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 TBC1D3LB9A6J9 549 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 GOLGA6L19H0YKK7 550 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 KPNA3O00505 521 aaPredicted RBP10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 YKT6O15498 198 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 FGF10O15520 208 aaPredicted RBP10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 BNIP3LO60238 219 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 SH3BP5O60239 455 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 PCDHGA12O60330 932 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 CBFA2T3O75081 653 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 RTN2O75298 545 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 ZNF821O75541 412 aaPredicted RBP10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 TBC1D3HP0C7X1 549 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 MYBL1P10243 752 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 CD38P28907 300 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 EPHB2P29323 1055 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 CCT8P50990 548 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 C21orf59P57076 290 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 YBEYP58557 167 aaPredicted RBP10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 PPP2CBP62714 309 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 PPP2CAP67775 309 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 SIM1P81133 766 aaPredicted RBP10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 FANCCQ00597 558 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 OVGP1Q12889 678 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 SUZ12Q15022 739 aaKnown RBP10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 POLD3Q15054 466 aaPredicted RBP10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 SKOR2Q2VWA4 1001 aaPredicted RBP10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 SETMARQ53H47 684 aaPredicted RBP10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 SLC45A4Q5BKX6 768 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 TBC1D3GQ6DHY5 549 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 TBC1D3CQ6IPX1 549 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 NAPEPLDQ6IQ20 393 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 SCYL2Q6P3W7 929 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 DPY19L3Q6ZPD9 716 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 PRPF39Q86UA1 669 aaKnown RBP10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 LUZP1Q86V48 1076 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 IQCHQ86VS3 1027 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 ZSCAN30Q86W11 494 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 TBC1D3Q8IZP1 549 aaPredicted RBP10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 CASKIN2Q8WXE0 1202 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 LRIG1Q96JA1 1093 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 CATSPERBQ9H7T0 1116 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 IL21RQ9HBE5 538 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 NDFIP2Q9NV92 336 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 DNAI1Q9UI46 699 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 PCOLCE2Q9UKZ9 415 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 BZW2Q9Y6E2 419 aaKnown RBP10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 SCINQ9Y6U3 715 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 WASF2Q9Y6W5 498 aa10.61□□□□□ -0.71
PTCD2P1-201ENST00000554393 IGF2RP11717 2491 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms