RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 FAM227BQ96M60 508 aa6.36□□□□□ -1.39
ATXN3-223ENST00000553686 EIF2AQ9BY44 585 aaKnown RBP6.36□□□□□ -1.39
ATXN3-223ENST00000553686 GLT8D2Q9H1C3 349 aa6.36□□□□□ -1.39
ATXN3-223ENST00000553686 ZNF768Q9H5H4 540 aaKnown RBP6.36□□□□□ -1.39
ATXN3-223ENST00000553686 FAM124BQ9H5Z6 455 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-223ENST00000553686 TRPM5Q9NZQ8 1165 aa6.36□□□□□ -1.39
ATXN3-223ENST00000553686 HES2Q9Y543 173 aa6.36□□□□□ -1.39
ATXN3-223ENST00000553686 COL4A3BPQ9Y5P4 624 aa6.36□□□□□ -1.39
ATXN3-223ENST00000553686 RALGAPA1Q6GYQ0 2036 aa6.36□□□□□ -1.39
ATXN3-223ENST00000553686 GREB1Q4ZG55 1949 aa6.36□□□□□ -1.39
ATXN3-223ENST00000553686 C2orf16Q68DN1 1984 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 A0A0D9SFI3 127 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 CASTOR2A6NHX0 329 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 CXorf49A8MYA2 514 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-223ENST00000553686 H7C4K7 107 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 GJB3O75712 270 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 B3GAT3O94766 335 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 THP07101 528 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 GNSP15586 552 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 AGXTP21549 392 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 AKAP5P24588 427 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 SFNP31947 248 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 GUCY2FP51841 1108 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 ARPP19P56211 112 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 CLRN1P58418 232 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 RNASE9P60153 205 aaKnown RBP6.35□□□□□ -1.39
ATXN3-223ENST00000553686 SETQ01105 290 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-223ENST00000553686 AMPD3Q01432 767 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 ROR1Q01973 937 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 SMAD1Q15797 465 aaKnown RBP6.35□□□□□ -1.39
ATXN3-223ENST00000553686 INAVAQ3KP66 663 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 SLC36A4Q6YBV0 504 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 ZNF589Q86UQ0 364 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-223ENST00000553686 TTC30AQ86WT1 665 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 ENGASEQ8NFI3 743 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 PRPF31Q8WWY3 499 aaKnown RBP6.35□□□□□ -1.39
ATXN3-223ENST00000553686 PSPC1Q8WXF1 523 aaKnown RBP6.35□□□□□ -1.39
ATXN3-223ENST00000553686 HOXB13Q92826 284 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-223ENST00000553686 LENG9Q96B70 501 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 FNBP1Q96RU3 617 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 PAAF1Q9BRP4 392 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 LDAHQ9H6V9 325 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 DCTPP1Q9H773 170 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 FSCN3Q9NQT6 498 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 MKS1Q9NXB0 559 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 PAXBP1Q9Y5B6 917 aa6.35□□□□□ -1.39
ATXN3-223ENST00000553686 DRGXA6NNA5 263 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 FAM86B1E9PN63 330 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 TMEM189-UBE2V1I3L0A0 370 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 PJA2O43164 708 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 SEC24AO95486 1093 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 FAM86B2P0C5J1 330 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 ATXN1LP0C7T5 689 aaKnown RBP6.34□□□□□ -1.39
ATXN3-223ENST00000553686 JUPP14923 745 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 ALOX15P16050 662 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-223ENST00000553686 MX1P20591 662 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 HNF1BP35680 557 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 JAK3P52333 1124 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 TLE3Q04726 772 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 ZNF33AQ06730 810 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 DPTQ07507 201 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 ITKQ08881 620 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 TWF1Q12792 350 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 SP140Q13342 867 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 PLD1Q13393 1074 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 LY6DQ14210 128 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 PLEKHG6Q3KR16 790 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 SYCP2LQ5T4T6 812 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 ATXN7L2Q5T6C5 722 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-223ENST00000553686 ZNF627Q7L945 461 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 GDF7Q7Z4P5 450 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 HEATR3Q7Z4Q2 680 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 ULK2Q8IYT8 1036 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 CBARPQ8N350 705 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-223ENST00000553686 AMER2Q8N7J2 671 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 OR2I1PQ8NGU4 316 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 RLN3Q8WXF3 142 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 FAXDC2Q96IV6 333 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 LRRC3BQ96PB8 259 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 SLC46A2Q9BY10 475 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 MINDY3Q9H8M7 445 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 PRDM16Q9HAZ2 1276 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 FBRSL1Q9HCM7 1045 aaKnown RBP6.34□□□□□ -1.39
ATXN3-223ENST00000553686 RIC8AQ9NPQ8 531 aa6.34□□□□□ -1.39
ATXN3-223ENST00000553686 BCCIPQ9P287 314 aaKnown RBP eCLIP6.34□□□□□ -1.39
ATXN3-223ENST00000553686 AFF4Q9UHB7 1163 aaKnown RBP6.34□□□□□ -1.39
ATXN3-223ENST00000553686 ATXN2Q99700 1313 aaKnown RBP6.33□□□□□ -1.4
ATXN3-223ENST00000553686 FAM149AA5PLN7 773 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 PLK4O00444 970 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 TNFSF14O43557 240 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 TLX3O43711 291 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-223ENST00000553686 ENDOD1O94919 500 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 CYP3A4P08684 503 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 ZNF883P0CG24 379 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 CDK4P11802 303 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 ACTN2P35609 894 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 ALDH1A3P47895 512 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 CDKN1CP49918 316 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-223ENST00000553686 TMPRSS3P57727 454 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 RAP2BP61225 183 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms