RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 OXR1Q8N573 874 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 FAM181AQ8N9Y4 354 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 ANKRD52Q8NB46 1076 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 KDM1BQ8NB78 822 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 ZNF248Q8NDW4 579 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 SEMA4DQ92854 862 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 SKA1Q96BD8 255 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 SERAC1Q96JX3 654 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 ZNF578Q96N58 590 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-219ENST00000553488 IMPG2Q9BZV3 1241 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 CLMPQ9H6B4 373 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 C7orf69Q9H7B7 122 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 CYP4F12Q9HCS2 524 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 ASCL3Q9NQ33 180 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 ARHGAP20Q9P2F6 1191 aa7.53□□□□□ -1.2
ATXN3-219ENST00000553488 TPX2Q9ULW0 747 aaKnown RBP7.53□□□□□ -1.2
ATXN3-219ENST00000553488 SPTAN1Q13813 2472 aaKnown RBP7.53□□□□□ -1.2
ATXN3-219ENST00000553488 LY6G6EA0A0G2JKS1 128 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 GOLGA6L7A0A1B0GV03 622 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 TTC34A8MYJ7 566 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 B8ZZF3 427 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 GSC2O15499 205 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 IRAK2O43187 625 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 SIGLEC6O43699 453 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 SDC3O75056 442 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 MT-CO3P00414 261 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 IGLV1-40P01703 118 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 ASLP04424 464 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 GIMD1P0DJR0 217 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 C6P13671 934 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 GOT1P17174 413 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 SLC8A1P32418 973 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 AFMP43652 599 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 UCNP55089 124 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 DAOAP59103 153 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 RPS24P62847 133 aaKnown RBP7.52□□□□□ -1.21
ATXN3-219ENST00000553488 ENPEPQ07075 957 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 LY6DQ14210 128 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 POU4F3Q15319 338 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 NFIL3Q16649 462 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 GOLGA7BQ2TAP0 167 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.52□□□□□ -1.21
ATXN3-219ENST00000553488 TAF1BQ53T94 588 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-219ENST00000553488 FSCBQ5H9T9 825 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 PITRM1Q5JRX3 1037 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 ARHGAP40Q5TG30 622 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 ERICH6BQ5W0A0 696 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 BSPRYQ5W0U4 402 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 FDX2Q6P4F2 183 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 KDM7AQ6ZMT4 941 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 MMS22LQ6ZRQ5 1243 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 SND1Q7KZF4 910 aaKnown RBP eCLIP7.52□□□□□ -1.21
ATXN3-219ENST00000553488 IQCHQ86VS3 1027 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 TRIM42Q8IWZ5 723 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 MFSD2AQ8NA29 543 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 HJURPQ8NCD3 748 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-219ENST00000553488 C2CD4AQ8NCU7 369 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-219ENST00000553488 FIBINQ8TAL6 211 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 FBF1Q8TES7 1133 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 GANCQ8TET4 914 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 FAXDC2Q96IV6 333 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 HEXIM2Q96MH2 286 aaKnown RBP7.52□□□□□ -1.21
ATXN3-219ENST00000553488 GSX1Q9H4S2 264 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-219ENST00000553488 ZSCAN16Q9H4T2 348 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-219ENST00000553488 CAAP1Q9H8G2 361 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 TMEM8AQ9HCN3 771 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 CISHQ9NSE2 258 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 TSPAN16Q9UKR8 245 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 ERVW-1Q9UQF0 538 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 TRAF3IP3Q9Y228 551 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 U3KQA8 63 aa7.52□□□□□ -1.21
ATXN3-219ENST00000553488 USP9YO00507 2555 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-219ENST00000553488 USP9XQ93008 2570 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-219ENST00000553488 EDDM13A0A1B0GTR0 161 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 A0A1B0GVM2 712 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 A0A1W2PNU3 283 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-219ENST00000553488 TARSL2A2RTX5 802 aaKnown RBP7.51□□□□□ -1.21
ATXN3-219ENST00000553488 HMX2A2RU54 273 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 ARHGAP6O43182 974 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 PLRG1O43660 514 aaKnown RBP7.51□□□□□ -1.21
ATXN3-219ENST00000553488 ACSL4O60488 711 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 RNASEH1O60930 286 aaKnown RBP7.51□□□□□ -1.21
ATXN3-219ENST00000553488 MPOP05164 745 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 SRPRAP08240 638 aaKnown RBP7.51□□□□□ -1.21
ATXN3-219ENST00000553488 C5AR1P21730 350 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 NR2F2P24468 414 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 ERVPABLB-1P60509 514 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 ST8SIA6P61647 398 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 GABREP78334 506 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 E2F1Q01094 437 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 BST2Q10589 180 aaKnown RBP7.51□□□□□ -1.21
ATXN3-219ENST00000553488 LRP8Q14114 963 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 SLC45A4Q5BKX6 768 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 AGBL4Q5VU57 503 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 RESP18Q5W5W9 173 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 NUGGCQ68CJ6 796 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 INTS8Q75QN2 995 aaKnown RBP7.51□□□□□ -1.21
ATXN3-219ENST00000553488 TRIM69Q86WT6 500 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 STK40Q8N2I9 435 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 SLC25A45Q8N413 288 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms