RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 DGKDQ16760 1214 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 FSTL5Q8N475 847 aaPredicted RBP23.43■■□□□ 1.34
NPAS3-206ENST00000548645 RNF139Q8WU17 664 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 C12orf43Q96C57 262 aaKnown RBP23.43■■□□□ 1.34
NPAS3-206ENST00000548645 MRPL45Q9BRJ2 306 aaKnown RBP23.43■■□□□ 1.34
NPAS3-206ENST00000548645 SPAG4Q9NPE6 437 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 NSMCE4AQ9NXX6 385 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 SARDHQ9UL12 918 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 TRIM64CA6NLI5 447 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 PHGDHO43175 533 aaKnown RBP23.43■■□□□ 1.34
NPAS3-206ENST00000548645 PDGFRBP09619 1106 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 TGFB3P10600 412 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 HMOX2P30519 316 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 HSDL1Q3SXM5 330 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 TREML2Q5T2D2 321 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 ELMSAN1Q6PJG2 1045 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 CATSPERGQ6ZRH7 1159 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 CCNYL1Q8N7R7 359 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 ANKFN1Q8N957 763 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 ANKRD52Q8NB46 1076 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 KCTD4Q8WVF5 259 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 TRAPPC12Q8WVT3 735 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 TFAP2CQ92754 450 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 HIPK3Q9H422 1215 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 ANLNQ9NQW6 1124 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 DUS2Q9NX74 493 aaKnown RBP23.43■■□□□ 1.34
NPAS3-206ENST00000548645 CACNA2D2Q9NY47 1150 aa23.43■■□□□ 1.34
NPAS3-206ENST00000548645 CNOT6Q9ULM6 557 aaKnown RBP23.43■■□□□ 1.34
NPAS3-206ENST00000548645 KCNK1O00180 336 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 DLX3O60479 287 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 STAMBPO95630 424 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 COL6A2P12110 1019 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 LCP1P13796 627 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 VARSP26640 1264 aaKnown RBP23.42■■□□□ 1.34
NPAS3-206ENST00000548645 LRP8Q14114 963 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 HMBOX1Q6NT76 420 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 EFCAB12Q6NXP0 572 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 CHST13Q8NET6 341 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 ZNF189O75820 626 aaPredicted RBP23.42■■□□□ 1.34
NPAS3-206ENST00000548645 DNAJB1P25685 340 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 CLCN3P51790 818 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 LRRC8EQ6NSJ5 796 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 PELI3Q8N2H9 469 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 TNIP2Q8NFZ5 429 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 APBA2Q99767 749 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 RHOJQ9H4E5 214 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 PICK1Q9NRD5 415 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 HOXC10Q9NYD6 342 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 CDH7Q9ULB5 785 aa23.42■■□□□ 1.34
NPAS3-206ENST00000548645 PRORSD1PA6NEY8 169 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 TARM1B6A8C7 271 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 NPHS1O60500 1241 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 PORP16435 677 aaPredicted RBP23.41■■□□□ 1.34
NPAS3-206ENST00000548645 ACADVLP49748 655 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 PRAMEP78395 509 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 RALGDSQ12967 914 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 KYAT1Q16773 422 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 IRAK1BP1Q5VVH5 260 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 CYP2R1Q6VVX0 501 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 CHSY3Q70JA7 882 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 ADAMTS16Q8TE57 1224 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 LRRC4Q9HBW1 653 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 TRPC7Q9HCX4 862 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 TMEM233B4DJY2 109 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 FAM163BP0C2L3 166 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 CYP2C9P11712 490 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 CKMT2P17540 419 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 NPY2RP49146 381 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 NAA20P61599 178 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 PAFAH1B3Q15102 231 aaKnown RBP23.41■■□□□ 1.34
NPAS3-206ENST00000548645 LY6KQ17RY6 165 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 CERCAMQ5T4B2 595 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 REP15Q6BDI9 236 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 ZC3HC1Q86WB0 502 aaKnown RBP23.41■■□□□ 1.34
NPAS3-206ENST00000548645 CAMKK2Q96RR4 588 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 DCUN1D5Q9BTE7 237 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 UPF3AQ9H1J1 476 aaKnown RBP23.41■■□□□ 1.34
NPAS3-206ENST00000548645 XPR1Q9UBH6 696 aa23.41■■□□□ 1.34
NPAS3-206ENST00000548645 TMEM221A6NGB7 291 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 ERI2A8K979 691 aaKnown RBP23.4■■□□□ 1.34
NPAS3-206ENST00000548645 BOLA2-SMG1P6H3BVE0 249 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 BMP2P12643 396 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 PTPRAP18433 802 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 TTC33Q6PID6 262 aaPredicted RBP23.4■■□□□ 1.34
NPAS3-206ENST00000548645 PLPPR4Q7Z2D5 763 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 C7orf31Q8N865 590 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 NFKBIZQ9BYH8 718 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 CHRAC1Q9NRG0 131 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 NCKIPSDQ9NZQ3 722 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 MAGED2Q9UNF1 606 aaPredicted RBP23.4■■□□□ 1.34
NPAS3-206ENST00000548645 KANSL1LA0AUZ9 987 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 PSMD12O00232 456 aaPredicted RBP23.4■■□□□ 1.34
NPAS3-206ENST00000548645 SLC35E2BP0CK96 405 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 PRKCQQ04759 706 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 SQLEQ14534 574 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 SAMD4BQ5PRF9 694 aaKnown RBP23.4■■□□□ 1.34
NPAS3-206ENST00000548645 ZNF786Q8N393 782 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 BORCS5Q969J3 196 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 THAP11Q96EK4 314 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 TCF12Q99081 682 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms