RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 FAM171A1Q5VUB5 890 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 PAPD7Q5XG87 772 aaKnown RBP4.41□□□□□ -1.7
PTCH1-216ENST00000548379 TBC1D9BQ66K14 1250 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 MZT2BQ6NZ67 158 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 SLC22A25Q6T423 547 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 NEK10Q6ZWH5 1172 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 TMTC3Q6ZXV5 915 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 R3HCC1LQ7Z5L2 792 aaKnown RBP4.41□□□□□ -1.7
PTCH1-216ENST00000548379 PLD5Q8N7P1 536 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 CLMNQ96JQ2 1002 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 ATP8A2Q9NTI2 1148 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 BLOC1S4Q9NUP1 217 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 IRAK4Q9NWZ3 460 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 GRHL1Q9NZI5 618 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 AASSQ9UDR5 926 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 ABCA6Q8N139 1617 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 FYCO1Q9BQS8 1478 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 WDR17Q8IZU2 1322 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 ZNF644Q9H582 1327 aaPredicted RBP4.41□□□□□ -1.7
PTCH1-216ENST00000548379 ATP7AQ04656 1500 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 SIGLEC1Q9BZZ2 1709 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 MYO5CQ9NQX4 1742 aa4.41□□□□□ -1.7
PTCH1-216ENST00000548379 SAMD9LQ8IVG5 1584 aa4.4□□□□□ -1.7
PTCH1-216ENST00000548379 CYP2D7A0A087X1C5 515 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.4□□□□□ -1.71
PTCH1-216ENST00000548379 A0A1W2PPH5 198 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 CXorf65A6NEN9 183 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 PGPEP1LA6NFU8 196 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 TSPAN4O14817 238 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 HBP1O60381 514 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 RBMXL2O75526 392 aaKnown RBP4.4□□□□□ -1.71
PTCH1-216ENST00000548379 NEURL1O76050 574 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 ADAP00813 363 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 BDNFP23560 247 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 ARL1P40616 181 aaPredicted RBP4.4□□□□□ -1.71
PTCH1-216ENST00000548379 PAFAH1B1P43034 410 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 ZNF667Q5HYK9 610 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 DEF8Q6ZN54 512 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 CHD1LQ86WJ1 897 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 ADGRG3Q86Y34 549 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 NELL1Q92832 810 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 TEFMQ96QE5 360 aaKnown RBP4.4□□□□□ -1.71
PTCH1-216ENST00000548379 SEMA4CQ9C0C4 833 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 RIOX1Q9H6W3 641 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 TBC1D22BQ9NU19 505 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 TAS2R10Q9NYW0 307 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 FLRT1Q9NZU1 646 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 KCND2Q9NZV8 630 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 TBC1D14Q9P2M4 693 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 NLKQ9UBE8 527 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 HSPB7Q9UBY9 170 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 SARDHQ9UL12 918 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 NLRP1Q9C000 1473 aa4.4□□□□□ -1.71
PTCH1-216ENST00000548379 MED1Q15648 1581 aaPredicted RBP4.4□□□□□ -1.71
PTCH1-216ENST00000548379 PZPP20742 1482 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.39□□□□□ -1.71
PTCH1-216ENST00000548379 NPIPB15A6NHN6 443 aaPredicted RBP4.39□□□□□ -1.71
PTCH1-216ENST00000548379 HMGB1P1B2RPK0 211 aaPredicted RBP4.39□□□□□ -1.71
PTCH1-216ENST00000548379 TAF4O00268 1085 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 LDLRAD4O15165 306 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 MSI1O43347 362 aaKnown RBP4.39□□□□□ -1.71
PTCH1-216ENST00000548379 BCAR3O75815 825 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 NUDT3O95989 172 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 SERPINC1P01008 464 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 CLEC3BP05452 202 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 CD63P08962 238 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 COX7A2P14406 83 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 CD72P21854 359 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 BMP5P22003 454 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 CERS1P27544 350 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 CHRNA5P30532 468 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 UFM1P61960 85 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 EFNB1P98172 346 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 ZNF268Q14587 947 aaPredicted RBP4.39□□□□□ -1.71
PTCH1-216ENST00000548379 DAZAP2Q15038 168 aaPredicted RBP4.39□□□□□ -1.71
PTCH1-216ENST00000548379 CEP78Q5JTW2 689 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 KIAA1614Q5VZ46 1190 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 LRIG3Q6UXM1 1119 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 FAM57BQ71RH2 274 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 RD3Q7Z3Z2 195 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 TRIM74Q86UV6 250 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 TRIM73Q86UV7 250 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 CPXM2Q8N436 756 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 ANKRD52Q8NB46 1076 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 UCMAQ8WVF2 138 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 HSPH1Q92598 858 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 TREX2Q9BQ50 279 aaPredicted RBP4.39□□□□□ -1.71
PTCH1-216ENST00000548379 SLC25A18Q9H1K4 315 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 ZNF304Q9HCX3 659 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 SPAG4Q9NPE6 437 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 PDGFCQ9NRA1 345 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 ORC3Q9UBD5 711 aaPredicted RBP4.39□□□□□ -1.71
PTCH1-216ENST00000548379 IPO11Q9UI26 975 aaKnown RBP4.39□□□□□ -1.71
PTCH1-216ENST00000548379 FBXO9Q9UK97 447 aaPredicted RBP4.39□□□□□ -1.71
PTCH1-216ENST00000548379 STRCQ7RTU9 1775 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 UGGT1Q9NYU2 1555 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 PREX2Q70Z35 1606 aa4.39□□□□□ -1.71
PTCH1-216ENST00000548379 C3P01024 1663 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms