RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 EXTL1Q92935 676 aa15.04■□□□□ -0
RTN3-214ENST00000545432 GLMNQ92990 594 aa15.04■□□□□ -0
RTN3-214ENST00000545432 VOPP1Q96AW1 172 aa15.04■□□□□ -0
RTN3-214ENST00000545432 IL12RB2Q99665 862 aa15.04■□□□□ -0
RTN3-214ENST00000545432 C2orf49Q9BVC5 232 aaPredicted RBP15.04■□□□□ -0
RTN3-214ENST00000545432 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.04■□□□□ -0
RTN3-214ENST00000545432 ANKMY1Q9P2S6 941 aa15.04■□□□□ -0
RTN3-214ENST00000545432 SPASTQ9UBP0 616 aa15.04■□□□□ -0
RTN3-214ENST00000545432 ARMCX3Q9UH62 379 aaPredicted RBP15.04■□□□□ -0
RTN3-214ENST00000545432 IL36AQ9UHA7 158 aa15.04■□□□□ -0
RTN3-214ENST00000545432 VPS51Q9UID3 782 aa15.04■□□□□ -0
RTN3-214ENST00000545432 PNMA8BQ9ULN7 279 aaPredicted RBP15.04■□□□□ -0
RTN3-214ENST00000545432 HS3ST4Q9Y661 456 aa15.04■□□□□ -0
RTN3-214ENST00000545432 BOD1L1Q8NFC6 3051 aa15.04■□□□□ -0
RTN3-214ENST00000545432 LRRK2Q5S007 2527 aa15.04■□□□□ -0
RTN3-214ENST00000545432 DRGXA6NNA5 263 aa15.03■□□□□ -0
RTN3-214ENST00000545432 E5RJQ4 531 aa15.03■□□□□ -0
RTN3-214ENST00000545432 TMX2-CTNND1H3BSU7 103 aa15.03■□□□□ -0
RTN3-214ENST00000545432 SNAP91O60641 907 aa15.03■□□□□ -0
RTN3-214ENST00000545432 LEFTY1O75610 366 aa15.03■□□□□ -0
RTN3-214ENST00000545432 CENPBP07199 599 aaPredicted RBP15.03■□□□□ -0
RTN3-214ENST00000545432 ADRB3P13945 408 aa15.03■□□□□ -0
RTN3-214ENST00000545432 ITGB7P26010 798 aa15.03■□□□□ -0
RTN3-214ENST00000545432 L1CAMP32004 1257 aa15.03■□□□□ -0
RTN3-214ENST00000545432 PRCPP42785 496 aa15.03■□□□□ -0
RTN3-214ENST00000545432 PMS1P54277 932 aaKnown RBP15.03■□□□□ -0
RTN3-214ENST00000545432 CDK17Q00537 523 aa15.03■□□□□ -0
RTN3-214ENST00000545432 PDE1CQ14123 709 aaPredicted RBP15.03■□□□□ -0
RTN3-214ENST00000545432 DRAP1Q14919 205 aaPredicted RBP15.03■□□□□ -0
RTN3-214ENST00000545432 ANKRD40Q6AI12 368 aa15.03■□□□□ -0
RTN3-214ENST00000545432 DENND1BQ6P3S1 775 aa15.03■□□□□ -0
RTN3-214ENST00000545432 DPY19L3Q6ZPD9 716 aa15.03■□□□□ -0
RTN3-214ENST00000545432 USP53Q70EK8 1073 aa15.03■□□□□ -0
RTN3-214ENST00000545432 SETD3Q86TU7 594 aaPredicted RBP15.03■□□□□ -0
RTN3-214ENST00000545432 DTX1Q86Y01 620 aa15.03■□□□□ -0
RTN3-214ENST00000545432 PLPP6Q8IY26 295 aa15.03■□□□□ -0
RTN3-214ENST00000545432 SMYD4Q8IYR2 804 aaPredicted RBP15.03■□□□□ -0
RTN3-214ENST00000545432 DCAF4L2Q8NA75 395 aa15.03■□□□□ -0
RTN3-214ENST00000545432 ATP11CQ8NB49 1132 aa15.03■□□□□ -0
RTN3-214ENST00000545432 LMX1AQ8TE12 382 aa15.03■□□□□ -0
RTN3-214ENST00000545432 RNF34Q969K3 372 aa15.03■□□□□ -0
RTN3-214ENST00000545432 CENPTQ96BT3 561 aa15.03■□□□□ -0
RTN3-214ENST00000545432 PPP1R16AQ96I34 528 aa15.03■□□□□ -0
RTN3-214ENST00000545432 CCDC3Q9BQI4 270 aa15.03■□□□□ -0
RTN3-214ENST00000545432 DYRK4Q9NR20 520 aa15.03■□□□□ -0
RTN3-214ENST00000545432 ST7Q9NRC1 585 aa15.03■□□□□ -0
RTN3-214ENST00000545432 PADI4Q9UM07 663 aa15.03■□□□□ -0
RTN3-214ENST00000545432 CXorf51AA0A1B0GTR3 108 aa15.02■□□□□ -0
RTN3-214ENST00000545432 TOR1BO14657 336 aa15.02■□□□□ -0
RTN3-214ENST00000545432 FPGTO14772 594 aa15.02■□□□□ -0
RTN3-214ENST00000545432 MUSKO15146 869 aa15.02■□□□□ -0
RTN3-214ENST00000545432 YY2O15391 372 aa15.02■□□□□ -0
RTN3-214ENST00000545432 BNIP3LO60238 219 aa15.02■□□□□ -0
RTN3-214ENST00000545432 ZMPSTE24O75844 475 aa15.02■□□□□ -0
RTN3-214ENST00000545432 CNTN5O94779 1100 aa15.02■□□□□ -0
RTN3-214ENST00000545432 RRM1P23921 792 aa15.02■□□□□ -0
RTN3-214ENST00000545432 CCKBRP32239 447 aa15.02■□□□□ -0
RTN3-214ENST00000545432 SLC20A2Q08357 652 aa15.02■□□□□ -0
RTN3-214ENST00000545432 SPIDRQ14159 915 aa15.02■□□□□ -0
RTN3-214ENST00000545432 TGIF1Q15583 401 aa15.02■□□□□ -0
RTN3-214ENST00000545432 C22orf39Q6P5X5 142 aa15.02■□□□□ -0
RTN3-214ENST00000545432 CRTC1Q6UUV9 634 aa15.02■□□□□ -0
RTN3-214ENST00000545432 DEFB106AQ8N104 65 aa15.02■□□□□ -0
RTN3-214ENST00000545432 PPM1KQ8N3J5 372 aa15.02■□□□□ -0
RTN3-214ENST00000545432 FBXO39Q8N4B4 442 aa15.02■□□□□ -0
RTN3-214ENST00000545432 KREMEN1Q96MU8 473 aa15.02■□□□□ -0
RTN3-214ENST00000545432 CEP44Q9C0F1 390 aa15.02■□□□□ -0
RTN3-214ENST00000545432 CLPBQ9H078 707 aa15.02■□□□□ -0
RTN3-214ENST00000545432 TCEAL2Q9H3H9 227 aaPredicted RBP15.02■□□□□ -0
RTN3-214ENST00000545432 DDIT4Q9NX09 232 aa15.02■□□□□ -0
RTN3-214ENST00000545432 VANGL2Q9ULK5 521 aa15.02■□□□□ -0
RTN3-214ENST00000545432 FLNCQ14315 2725 aa15.02□□□□□ -0.01
RTN3-214ENST00000545432 TSPAN6O43657 245 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 PAGE1O75459 146 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 LIPCP11150 499 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 ADKP55263 362 aaKnown RBP15.01□□□□□ -0.01
RTN3-214ENST00000545432 YPEL5P62699 121 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 NFKB2Q00653 900 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 LRRC63Q05C16 580 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 PKP1Q13835 747 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 TBR1Q16650 682 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 ALFQ53S48 1182 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 LVRNQ6Q4G3 990 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 RAB11FIP2Q7L804 512 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 B3GNT8Q7Z7M8 397 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 ARHGEF19Q8IW93 802 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 WDTC1Q8N5D0 677 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 EHBP1Q8NDI1 1231 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 ZNF606Q8WXB4 792 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 SNX21Q969T3 373 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 RAB7BQ96AH8 199 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 LRRC61Q9BV99 259 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 B3GNT4Q9C0J1 378 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 GEMIN8Q9NWZ8 242 aaKnown RBP15.01□□□□□ -0.01
RTN3-214ENST00000545432 ZNF212Q9UDV6 495 aa15.01□□□□□ -0.01
RTN3-214ENST00000545432 IPO11Q9UI26 975 aaKnown RBP15.01□□□□□ -0.01
RTN3-214ENST00000545432 NBASA2RRP1 2371 aa15□□□□□ -0.01
RTN3-214ENST00000545432 IGLV3-10A0A075B6K4 115 aa15□□□□□ -0.01
RTN3-214ENST00000545432 A0A0D9SEW6 157 aa15□□□□□ -0.01
RTN3-214ENST00000545432 A0A1W2PQ27 194 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms