RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 ENO3P13929 434 aaPredicted RBP13.92□□□□□ -0.18
VPS33A-208ENST00000543633 KCNE1P15382 129 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 TKTP29401 623 aaKnown RBP13.92□□□□□ -0.18
VPS33A-208ENST00000543633 COG7P83436 770 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 TXNL4AP83876 142 aaKnown RBP13.92□□□□□ -0.18
VPS33A-208ENST00000543633 USP10Q14694 798 aaKnown RBP13.92□□□□□ -0.18
VPS33A-208ENST00000543633 GRIK4Q16099 956 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 XKR4Q5GH76 650 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 LSMEM2Q8N112 164 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 SIX6OS1Q8N1H7 587 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 PELI3Q8N2H9 469 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 CEP70Q8NHQ1 597 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 GFM2Q969S9 779 aaKnown RBP13.92□□□□□ -0.18
VPS33A-208ENST00000543633 TEKT5Q96M29 485 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 CATSPER2Q96P56 530 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 C16orf70Q9BSU1 422 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 NUF2Q9BZD4 464 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 RRAGCQ9HB90 399 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 PIGVQ9NUD9 493 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 RBPJLQ9UBG7 517 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 ZDHHC2Q9UIJ5 367 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 CLEC11AQ9Y240 323 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 NRCAMQ92823 1304 aa13.92□□□□□ -0.18
VPS33A-208ENST00000543633 A0A087X1B8 175 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 TCAF2A6NFQ2 919 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 RECQL4O94761 1208 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 LMO2P25791 158 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 TKTL1P51854 596 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 NAGLUP54802 743 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 CCNA1P78396 465 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 TTLL12Q14166 644 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-208ENST00000543633 PTK2BQ14289 1009 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 CERCAMQ5T4B2 595 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 KLC3Q6P597 504 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 CHSY3Q70JA7 882 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 CHERPQ8IWX8 916 aaKnown RBP13.91□□□□□ -0.18
VPS33A-208ENST00000543633 CENPLQ8N0S6 344 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-208ENST00000543633 METTL25Q8N6Q8 603 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 KDM1BQ8NB78 822 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 DPF3Q92784 378 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 NMD3Q96D46 503 aaKnown RBP13.91□□□□□ -0.18
VPS33A-208ENST00000543633 SCYL1Q96KG9 808 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 PKP2Q99959 881 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 MRPL46Q9H2W6 279 aaKnown RBP13.91□□□□□ -0.18
VPS33A-208ENST00000543633 ADAMTS10Q9H324 1103 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 R3HDMLQ9H3Y0 253 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 WDR6Q9NNW5 1121 aaKnown RBP13.91□□□□□ -0.18
VPS33A-208ENST00000543633 TXNRD2Q9NNW7 524 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 ACOT9Q9Y305 439 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 COPG1Q9Y678 874 aaKnown RBP13.91□□□□□ -0.18
VPS33A-208ENST00000543633 GMEB1Q9Y692 573 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 SDHDO14521 159 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 HCRTO43612 131 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 HUS1O60921 280 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 USP12O75317 370 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 PSMC3P17980 439 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 NFKB1P19838 968 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 DPP6P42658 865 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 GTF2A2P52657 109 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 RAB10P61026 200 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 PITX1P78337 314 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-208ENST00000543633 MS4A2Q01362 244 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 STX5Q13190 355 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 PPIL2Q13356 520 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 ARL13BQ3SXY8 428 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 MARCH8Q5T0T0 291 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 TAPT1Q6NXT6 567 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 HACD2Q6Y1H2 254 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 CATSPER4Q7RTX7 472 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 FSTL5Q8N475 847 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-208ENST00000543633 RNF217Q8TC41 542 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 CCDC126Q96EE4 140 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 ZNF597Q96LX8 424 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 CNBD2Q96M20 576 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 UHRF1Q96T88 793 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-208ENST00000543633 OSBPL11Q9BXB4 747 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 SENP6Q9GZR1 1112 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-208ENST00000543633 UNC93B1Q9H1C4 597 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 CXCL16Q9H2A7 254 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 NCKIPSDQ9NZQ3 722 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 FBXW11Q9UKB1 542 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 SQORQ9Y6N5 450 aa13.91□□□□□ -0.18
VPS33A-208ENST00000543633 RRN3P2A6NIE6 340 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 H3BRB1 525 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 DLX3O60479 287 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 F9P00740 461 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 NMBRP28336 390 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 GJA5P36382 358 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 PKNOX1P55347 436 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 OLIG2Q13516 323 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 SQLEQ14534 574 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 PPP2R5DQ14738 602 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 MYLK3Q32MK0 819 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 PCID2Q5JVF3 399 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 MAMDC4Q6UXC1 1216 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 AGR3Q8TD06 166 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 KCTD4Q8WVF5 259 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 KLHL32Q96NJ5 620 aa13.9□□□□□ -0.18
VPS33A-208ENST00000543633 MRPL57Q9BQC6 102 aaKnown RBP13.9□□□□□ -0.18
VPS33A-208ENST00000543633 EIF2AQ9BY44 585 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms