RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 FLRT2O43155 660 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 KDELR3O43731 214 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TRIM16O95361 564 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 FTLP02792 175 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 FTH1P19P0C7X4 201 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SKILP12757 684 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 MAT2AP31153 395 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 NUDT1P36639 197 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CCT8P50990 548 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CCNHP51946 323 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 AIF1P55008 147 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 NXPH1P58417 271 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 POLD3Q15054 466 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ASIC2Q16515 512 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ZNF284Q2VY69 593 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SFMBT2Q5VUG0 894 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 NAPEPLDQ6IQ20 393 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 NEK5Q6P3R8 708 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 DCUN1D2Q6PH85 259 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CYP4V2Q6ZWL3 525 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ERN2Q76MJ5 926 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PRPF39Q86UA1 669 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 LUZP1Q86V48 1076 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SPATS2Q86XZ4 545 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CHCHD4Q8N4Q1 142 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 RTL3Q8N8U3 475 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 MFSD2AQ8NA29 543 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TMEM145Q8NBT3 493 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SAP25Q8TEE9 199 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ADAMTS14Q8WXS8 1223 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CCDC114Q96M63 670 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ELF4Q99607 663 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 HEPHQ9BQS7 1158 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PARVAQ9NVD7 372 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ZFR2Q9UPR6 939 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 DMTF1Q9Y222 760 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 NEUROG3Q9Y4Z2 214 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PLXNB3Q9ULL4 1909 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 KNTC1P50748 2209 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PTPRBP23467 1997 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 A0A1W2PQU0 124 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 C1QTNF9BB2RNN3 333 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ATMINO43313 823 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 DFNA5O60443 496 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 RAMP2O60895 175 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 RNGTTO60942 597 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 C1QTNF9P0C862 333 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ETFBP38117 255 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 C21orf59P57076 290 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 FANCCQ00597 558 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 IL9RQ01113 521 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SUZ12Q15022 739 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CA9Q16790 459 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TMEM259Q4ZIN3 620 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 EFHC2Q5JST6 749 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PPP1R2P3Q6NXS1 205 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SCYL2Q6P3W7 929 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TMC6Q7Z403 805 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ADAT2Q7Z6V5 191 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 HORMAD1Q86X24 394 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 UMODL1-AS1Q8N2C9 162 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PNPLA1Q8N8W4 532 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 GRIN3AQ8TCU5 1115 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 RHBDD1Q8TEB9 315 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PEBP4Q96S96 227 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ISCUQ9H1K1 167 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ERVMER34-1Q9H9K5 563 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 AASDHPPTQ9NRN7 309 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 HECAQ9UBI9 543 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CA5BQ9Y2D0 317 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PCDHB9Q9Y5E1 797 aa13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 GOLGA4Q13439 2230 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1A-215ENST00000543359 A0A1W2PQJ5 194 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ANKRD62A6NC57 917 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 GSRP00390 522 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SERPINC1P01008 464 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CAPNS1P04632 268 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PROS1P07225 676 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ATXN1LP0C7T5 689 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ITGB7P26010 798 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 EPHB2P29323 1055 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 GKP32189 559 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 RXRGP48443 463 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ST3GAL2Q16842 350 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SETMARQ53H47 684 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SEL1L3Q68CR1 1132 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 UNQ6494/PRO21346Q6UXR6 183 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 LEKR1Q6ZMV7 388 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 KANSL1Q7Z3B3 1105 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 IQCHQ86VS3 1027 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 KDF1Q8NAX2 398 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 FNIP1Q8TF40 1166 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SKA1Q96BD8 255 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 HMCESQ96FZ2 354 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CDC6Q99741 560 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 EPAS1Q99814 870 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 LRRC19Q9H756 370 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 GPATCH2LQ9NWQ4 482 aa13.34□□□□□ -0.27
TNFRSF1A-215ENST00000543359 MSRB2Q9Y3D2 182 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms