RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 ABCG4Q9H172 646 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 NLGN3Q9NZ94 848 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 IPO11Q9UI26 975 aaKnown RBP17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 FHOD1Q9Y613 1164 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 WASF2Q9Y6W5 498 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 H3BM21 787 aa17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 ERCC5P28715 1186 aaPredicted RBP17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 L1CAMP32004 1257 aa17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 CCNHP51946 323 aaPredicted RBP17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 C2CD6Q53TS8 623 aa17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 HSP90AA4PQ58FG1 418 aa17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 MIIPQ5JXC2 388 aa17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 ARCQ7LC44 396 aa17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 RYBPQ8N488 228 aaPredicted RBP17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 CPA5Q8WXQ8 436 aa17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 DEPDC7Q96QD5 511 aa17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 ZDHHC6Q9H6R6 413 aa17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 USP29Q9HBJ7 922 aa17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 PPARGC1AQ9UBK2 798 aaKnown RBP17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 FCF1Q9Y324 198 aaKnown RBP17.75■□□□□ 0.43
PPP1CA-210ENST00000542876 RNF103O00237 685 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 NEMP1O14524 444 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 SCAMP1O15126 338 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 ZNF821O75541 412 aaPredicted RBP17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 ZMPSTE24O75844 475 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 PAK4O96013 591 aaPredicted RBP17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 UCHL3P15374 230 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 RABIFP47224 123 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 GEMIN4P57678 1058 aaKnown RBP17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 ATP11AP98196 1134 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 TBC1D25Q3MII6 688 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 ZNF542PQ5EBM4 170 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 NAA35Q5VZE5 725 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 KYAT3Q6YP21 454 aaKnown RBP17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 SLC22A18ASQ8N1D0 253 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 APOLD1Q96LR9 279 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 FCRL3Q96P31 734 aaPredicted RBP17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 STK33Q9BYT3 514 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 PRORYQ9H606 182 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 HECAQ9UBI9 543 aaPredicted RBP17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 TMEM59LQ9UK28 342 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 HPCAL4Q9UM19 191 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 FADS3Q9Y5Q0 445 aa17.74■□□□□ 0.43
PPP1CA-210ENST00000542876 CXorf51AA0A1B0GTR3 108 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 FPGTO14772 594 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 AP1G1O43747 822 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 OPA1O60313 960 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 GP1BAP07359 652 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 ARF5P84085 180 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 CCDC173Q0VFZ6 552 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 POLD3Q15054 466 aaPredicted RBP17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 RWDD4Q6NW29 188 aaKnown RBP17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 DPY19L2P1Q6NXN4 242 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 PARS2Q7L3T8 475 aaKnown RBP17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 NOP9Q86U38 636 aaKnown RBP17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 PARGQ86W56 976 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 ZNF677Q86XU0 584 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 LSMEM2Q8N112 164 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 FAM181AQ8N9Y4 354 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 RAB7BQ96AH8 199 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 ISG20Q96AZ6 181 aaKnown RBP17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 BMFQ96LC9 184 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 LGMNQ99538 433 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 TM6SF2Q9BZW4 377 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 RETREG1Q9H6L5 497 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 METTL5Q9NRN9 209 aaKnown RBP17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 NCKIPSDQ9NZQ3 722 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 OR12D3Q9UGF7 316 aa17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 ARID1BQ8NFD5 2236 aaPredicted RBP17.73■□□□□ 0.43
PPP1CA-210ENST00000542876 SPTY2D1-AS1A0A0U1RR47 76 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 POM121BA6NF01 834 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 F8VZ95 297 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 K7ESM1 405 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 TK2O00142 265 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 TSPAN6O43657 245 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 CSF2P04141 144 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 MMEP08473 750 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 SDC4P31431 198 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 MAPKAPK2P49137 400 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 NOMO3P69849 1222 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 C19orf57Q0VDD7 668 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 CDO1Q16878 200 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 DPCR1Q3MIW9 517 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 TRNP1Q6NT89 227 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 BNIPLQ7Z465 357 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 PLPP6Q8IY26 295 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 EMC1Q8N766 993 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 MAPK15Q8TD08 544 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 SLC39A7Q92504 469 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 ARHGEF26Q96DR7 871 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 ZNF578Q96N58 590 aaPredicted RBP17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 NAA15Q9BXJ9 866 aaKnown RBP17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 OSBPL2Q9H1P3 480 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 CLSTN2Q9H4D0 955 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 ZNF212Q9UDV6 495 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 PCDHB1Q9Y5F3 818 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 RAI2Q9Y5P3 530 aa17.72■□□□□ 0.43
PPP1CA-210ENST00000542876 C16orf96A6NNT2 1141 aa17.71■□□□□ 0.43
PPP1CA-210ENST00000542876 RIOK3O14730 519 aaKnown RBP17.71■□□□□ 0.43
PPP1CA-210ENST00000542876 USP12O75317 370 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms