RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 LRIG2O94898 1065 aa11.22□□□□□ -0.61
PBX1-212ENST00000540236 SLC26A3P40879 764 aa11.22□□□□□ -0.61
PBX1-212ENST00000540236 SLC12A3P55017 1021 aa11.22□□□□□ -0.61
PBX1-212ENST00000540236 MEP1AQ16819 746 aa11.22□□□□□ -0.61
PBX1-212ENST00000540236 GPAT2Q6NUI2 795 aa11.22□□□□□ -0.61
PBX1-212ENST00000540236 FAM83FQ8NEG4 500 aaPredicted RBP11.22□□□□□ -0.61
PBX1-212ENST00000540236 OR5H6Q8NGV6 325 aa11.22□□□□□ -0.61
PBX1-212ENST00000540236 TBC1D15Q8TC07 691 aa11.22□□□□□ -0.61
PBX1-212ENST00000540236 NECTIN4Q96NY8 510 aa11.22□□□□□ -0.61
PBX1-212ENST00000540236 IL12RB2Q99665 862 aa11.22□□□□□ -0.61
PBX1-212ENST00000540236 THG1LQ9NWX6 298 aaKnown RBP11.22□□□□□ -0.61
PBX1-212ENST00000540236 NSMCE4AQ9NXX6 385 aa11.22□□□□□ -0.61
PBX1-212ENST00000540236 USE1Q9NZ43 259 aa11.22□□□□□ -0.61
PBX1-212ENST00000540236 OAZ3Q9UMX2 235 aa11.22□□□□□ -0.61
PBX1-212ENST00000540236 CPQQ9Y646 472 aa11.22□□□□□ -0.61
PBX1-212ENST00000540236 USP31Q70CQ4 1352 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 DHRS12A0PJE2 317 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 TGDSO95455 350 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 CSF2P04141 144 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 SNAPC2Q13487 334 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 CDHR3Q6ZTQ4 885 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 FAM35AQ86V20 835 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 RAB43Q86YS6 212 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 SFRP1Q8N474 314 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 PCYOX1LQ8NBM8 494 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 MCOLN3Q8TDD5 553 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 RPL10LQ96L21 214 aaKnown RBP11.21□□□□□ -0.61
PBX1-212ENST00000540236 TNKS2Q9H2K2 1166 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 FETUBQ9UGM5 382 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 SLC9A8Q9Y2E8 581 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 TMEM233B4DJY2 109 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 HDCP19113 662 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 RCAN1P53805 252 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 TUBA3CQ13748 450 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 SLFN13Q68D06 897 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 RWDD4Q6NW29 188 aaKnown RBP11.21□□□□□ -0.61
PBX1-212ENST00000540236 PLEKHG7Q6ZR37 379 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 CATSPER4Q7RTX7 472 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 TRIM48Q8IWZ4 208 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 ZNF276Q8N554 614 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 KCTD17Q8N5Z5 321 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 SHCBP1Q8NEM2 672 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 FOXP3Q9BZS1 431 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 LHPPQ9H008 270 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 ACSS3Q9H6R3 686 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 SPON1Q9HCB6 807 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 PRDM8Q9NQV8 689 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 CHRAC1Q9NRG0 131 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 CES1P23141 567 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 POLR2BP30876 1174 aaKnown RBP11.21□□□□□ -0.61
PBX1-212ENST00000540236 RPL6Q02878 288 aaKnown RBP11.21□□□□□ -0.61
PBX1-212ENST00000540236 NFATC3Q12968 1075 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 SPCS2Q15005 226 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 OTOP3Q7RTS5 596 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 PID1Q7Z2X4 250 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 FIBCD1Q8N539 461 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 EXD1Q8NHP7 514 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 EPS8L1Q8TE68 723 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 NCSTNQ92542 709 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 NLRP4Q96MN2 994 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 MFHAS1Q9Y4C4 1052 aa11.21□□□□□ -0.61
PBX1-212ENST00000540236 TRAFD1O14545 582 aaPredicted RBP11.21□□□□□ -0.62
PBX1-212ENST00000540236 ZNF682O95780 498 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 CHRM5P08912 532 aaPredicted RBP11.21□□□□□ -0.62
PBX1-212ENST00000540236 RPL14P50914 215 aaKnown RBP11.21□□□□□ -0.62
PBX1-212ENST00000540236 DSC3Q14574 896 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 DGKKQ5KSL6 1271 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 SUSD4Q5VX71 490 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 RPS27LQ71UM5 84 aaKnown RBP11.21□□□□□ -0.62
PBX1-212ENST00000540236 IFT43Q96FT9 208 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 CNPY3Q9BT09 278 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 C2orf49Q9BVC5 232 aaPredicted RBP11.21□□□□□ -0.62
PBX1-212ENST00000540236 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.21□□□□□ -0.62
PBX1-212ENST00000540236 EML4Q9HC35 981 aaKnown RBP11.21□□□□□ -0.62
PBX1-212ENST00000540236 SPAG4Q9NPE6 437 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 RAD54BQ9Y620 910 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 ADGRB3O60242 1522 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 SDR42E2A6NKP2 422 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 AASDHQ4L235 1098 aaPredicted RBP11.21□□□□□ -0.62
PBX1-212ENST00000540236 TMEM119Q4V9L6 283 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 SCIMPQ6UWF3 145 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 ZFPM1Q8IX07 1006 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 C12orf56Q8IXR9 622 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 CYP2W1Q8TAV3 490 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 ATL1Q8WXF7 558 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 NEURL2Q9BR09 285 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 FBXO28Q9NVF7 368 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 CD274Q9NZQ7 290 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 SHOC2Q9UQ13 582 aa11.21□□□□□ -0.62
PBX1-212ENST00000540236 PRR23D1E9PI22 279 aaPredicted RBP11.2□□□□□ -0.62
PBX1-212ENST00000540236 CD48P09326 243 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 PRR23D2P0DMB1 279 aaPredicted RBP11.2□□□□□ -0.62
PBX1-212ENST00000540236 GTF2A2P52657 109 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 MXD1Q05195 221 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 SLC41A1Q8IVJ1 513 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 MPP5Q8N3R9 675 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 CANT1Q8WVQ1 401 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 TRNT1Q96Q11 434 aaKnown RBP11.2□□□□□ -0.62
PBX1-212ENST00000540236 PLCL2Q9UPR0 1127 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 ARHGEF28Q8N1W1 1705 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms