RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ZRANB3Q5FWF4 1079 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 LPCAT4Q643R3 524 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 OVOS1Q6IE37 1185 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 TTC7BQ86TV6 843 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 PLD3Q8IV08 490 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.12□□□□□ -0.79
TRAF1-202ENST00000540010 FAM162AQ96A26 154 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 PAAF1Q9BRP4 392 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 PHACTR1Q9C0D0 580 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 CATSPERBQ9H7T0 1116 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 NUDT5Q9UKK9 219 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 CDH9Q9ULB4 789 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 TSC22D4Q9Y3Q8 395 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 DEAF1O75398 565 aaPredicted RBP10.12□□□□□ -0.79
TRAF1-202ENST00000540010 DAB1O75553 588 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 BDNFP23560 247 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 PSMB4P28070 264 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 NFYCQ13952 458 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 PARP6Q2NL67 630 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 AASDHQ4L235 1098 aaPredicted RBP10.12□□□□□ -0.79
TRAF1-202ENST00000540010 ZNF470Q6ECI4 717 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 CHSY1Q86X52 802 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 RBM15BQ8NDT2 890 aaKnown RBP10.12□□□□□ -0.79
TRAF1-202ENST00000540010 BHLHE22Q8NFJ8 381 aaPredicted RBP10.12□□□□□ -0.79
TRAF1-202ENST00000540010 SMARCD1Q96GM5 515 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 PCED1BQ96HM7 432 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 TRAPPC9Q96Q05 1148 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 CYLDQ9NQC7 956 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 AAASQ9NRG9 546 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 ATP6AP2A0A1C7CYW4 349 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 ATP6AP2O75787 350 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 FBXO21O94952 628 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 IGFBP6P24592 240 aaPredicted RBP10.12□□□□□ -0.79
TRAF1-202ENST00000540010 NOS2P35228 1153 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 LRRC74AQ0VAA2 488 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 GRIK3Q13003 919 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 TUSC3Q13454 348 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 ATP1A4Q13733 1029 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 NOMO1Q15155 1222 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 ANKRD22Q5VYY1 191 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 RHBDF2Q6PJF5 856 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 KYAT3Q6YP21 454 aaKnown RBP10.12□□□□□ -0.79
TRAF1-202ENST00000540010 CLEC20AQ6ZU45 233 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 SPATA6LQ8N4H0 392 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 PLD5Q8N7P1 536 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 RPRD1AQ96P16 312 aaPredicted RBP10.12□□□□□ -0.79
TRAF1-202ENST00000540010 POPDC2Q9HBU9 364 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 PNPOQ9NVS9 261 aa10.12□□□□□ -0.79
TRAF1-202ENST00000540010 A0A0U1RQF3 1178 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 LINC00854A0A1B0GVQ3 168 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 HEATR9A2RTY3 570 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 TRDMT1O14717 391 aaKnown RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 BEST1O76090 585 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 TSPAN8P19075 237 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 ATP6V1B2P21281 511 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 HOXC8P31273 242 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 NRLP54845 237 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 WDR4P57081 412 aaKnown RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 CCDC185Q8N715 623 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 RIN3Q8TB24 985 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 MYLPFQ96A32 169 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 SIKE1Q9BRV8 207 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 ZNF670Q9BS34 389 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 PCDHGB4Q9UN71 923 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 CNTRLQ7Z7A1 2325 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 ATXN2Q99700 1313 aaKnown RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 C1orf232A0A0U1RR37 186 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 MDM4O15151 490 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 TNFAIP8O95379 198 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 ALDH1A3P47895 512 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 UBE3AQ05086 875 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 FASTKQ14296 549 aaKnown RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 SLC25A52Q3SY17 297 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 PTRHD1Q6GMV3 140 aaKnown RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 MFN1Q8IWA4 741 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 RMND5BQ96G75 393 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 HHIPL1Q96JK4 782 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 ZNF333Q96JL9 665 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 EPB41L4BQ9H329 900 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 MMADHCQ9H3L0 296 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 CRTAC1Q9NQ79 661 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 DSEQ9UL01 958 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 AAR2Q9Y312 384 aaKnown RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 APOA1P02647 267 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 INHAP05111 366 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 PYGLP06737 847 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 ROR2Q01974 943 aaKnown RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 RNASEH2BQ5TBB1 312 aaKnown RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 VSTM1Q6UX27 236 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 TFAP2DQ7Z6R9 452 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 PCDH19Q8TAB3 1148 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 ZNF398Q8TD17 642 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 NT5MQ9NPB1 228 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 WDR70Q9NW82 654 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 PNMA8BQ9ULN7 279 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 AP4S1Q9Y587 144 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 MRASO14807 208 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 CLOCKO15516 846 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 TOMM70O94826 608 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 GOT1P17174 413 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms