RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 RPL10LQ96L21 214 aaKnown RBP10.84□□□□□ -0.67
TNFRSF1A-211ENST00000538363 IL12RB2Q99665 862 aa10.84□□□□□ -0.67
TNFRSF1A-211ENST00000538363 RPP25Q9BUL9 199 aaKnown RBP10.84□□□□□ -0.67
TNFRSF1A-211ENST00000538363 FAM129AQ9BZQ8 928 aa10.84□□□□□ -0.67
TNFRSF1A-211ENST00000538363 KCNK12Q9HB15 430 aa10.84□□□□□ -0.67
TNFRSF1A-211ENST00000538363 GDF3Q9NR23 364 aa10.84□□□□□ -0.67
TNFRSF1A-211ENST00000538363 UBP1Q9NZI7 540 aa10.84□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ZNF212Q9UDV6 495 aa10.84□□□□□ -0.67
TNFRSF1A-211ENST00000538363 CLEC4EQ9ULY5 219 aa10.84□□□□□ -0.67
TNFRSF1A-211ENST00000538363 DOCK8Q8NF50 2099 aa10.84□□□□□ -0.67
TNFRSF1A-211ENST00000538363 COL6A3P12111 3177 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 MYOFQ9NZM1 2061 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 REV3LO60673 3130 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ANHXE9PGG2 379 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 AP3B1O00203 1094 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 HLA-DQB2P05538 268 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SERPINF2P08697 491 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 HOXB1P14653 301 aaPredicted RBP10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 HLA-FP30511 346 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 GJA4P35212 333 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SNRPD1P62314 119 aaKnown RBP10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 VSNL1P62760 191 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 MORF4L2Q15014 288 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PCSK7Q16549 785 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 INO80DQ53TQ3 878 aaPredicted RBP10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 DNAJC21Q5F1R6 531 aaKnown RBP10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 WDR93Q6P2C0 686 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CENPUQ71F23 418 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 KDELC2Q7Z4H8 507 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 LINC00523Q86TU6 105 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PDIK1LQ8N165 341 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SLC44A3Q8N4M1 653 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 IPMKQ8NFU5 416 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 OR52K2Q8NGK3 314 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PDCD6IPQ8WUM4 868 aaKnown RBP10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 MAML1Q92585 1016 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 FATE1Q969F0 183 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 RTP4Q96DX8 246 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ASIC4Q96FT7 647 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 FMO2Q99518 471 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SEMA3CQ99985 751 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 GBA3Q9H227 469 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 HPS4Q9NQG7 708 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 FAM153AQ9UHL3 310 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ERVW-1Q9UQF0 538 aa10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 FCF1Q9Y324 198 aaKnown RBP10.83□□□□□ -0.68
TNFRSF1A-211ENST00000538363 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ERI2A8K979 691 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 GFRA2O00451 464 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 TMCC1O94876 653 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SEC31AO94979 1220 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 METTL18O95568 372 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ASGR2P07307 311 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SRPRAP08240 638 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CD86P42081 329 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 GRIA2P42262 883 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SERPINH1P50454 418 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 EPHB1P54762 984 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 DSC2Q02487 901 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 TFF2Q03403 129 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 TDGQ13569 410 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SPARCL1Q14515 664 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 BBS9Q3SYG4 887 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 FUT11Q495W5 492 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 FAM182AQ5T1J6 154 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 NAPEPLDQ6IQ20 393 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CASC4Q6P4E1 433 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SRLQ86TD4 932 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 RNF135Q8IUD6 432 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 NDUFAF2Q8N183 169 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CYB5D2Q8WUJ1 264 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ART4Q93070 314 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 EXOC2Q96KP1 924 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 GDAP1L1Q96MZ0 367 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 FCRL5Q96RD9 977 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 RBM15Q96T37 977 aaKnown RBP eCLIP10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 P2RY13Q9BPV8 354 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 FRMD8Q9BZ67 464 aaPredicted RBP10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 FOXP3Q9BZS1 431 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 TM6SF2Q9BZW4 377 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SLC25A51Q9H1U9 297 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 C8orf33Q9H7E9 229 aaPredicted RBP10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 LRRC40Q9H9A6 602 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ARFGAP3Q9NP61 516 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ELOVL2Q9NXB9 296 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SAMD15Q9P1V8 674 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 THEGQ9P2T0 379 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 FBXL21Q9UKT6 434 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 SHOC2Q9UQ13 582 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 NEU2Q9Y3R4 380 aa10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 NYNRINQ9P2P1 1898 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1A-211ENST00000538363 DYNC1I1O14576 645 aa10.81□□□□□ -0.68
TNFRSF1A-211ENST00000538363 TRIM24O15164 1050 aa10.81□□□□□ -0.68
TNFRSF1A-211ENST00000538363 KAT7O95251 611 aa10.81□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CPP00450 1065 aa10.81□□□□□ -0.68
TNFRSF1A-211ENST00000538363 DLDP09622 509 aaKnown RBP10.81□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CISD3P0C7P0 127 aa10.81□□□□□ -0.68
TNFRSF1A-211ENST00000538363 IL9P15248 144 aa10.81□□□□□ -0.68
TNFRSF1A-211ENST00000538363 XPAP23025 273 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms