RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 ALLCQ8N6M5 410 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 KLHL23Q8NBE8 558 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 APOPT1Q96IL0 206 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 ATP9AO75110 1047 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 ACRP10323 421 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 PKNOX1P55347 436 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 ITIH4Q14624 930 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 MRPL48Q96GC5 212 aaKnown RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 C6orf62Q9GZU0 229 aaPredicted RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 CDT1Q9H211 546 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 RAD21L1Q9H4I0 556 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 TMEM134Q9H6X4 195 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 DNAJC18Q9H819 358 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 CROTQ9UKG9 612 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 CNTNAP1P78357 1384 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 PTENP60484 403 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 LZTR1Q8N653 840 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 KLHL5Q96PQ7 755 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 OLFM1Q99784 485 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 ACAT2Q9BWD1 397 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 BLOC1S4Q9NUP1 217 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 EVA1BQ9NVM1 165 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 YDJCA8MPS7 323 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 ZMPSTE24O75844 475 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 OR6B1O95007 311 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 S100A3P33764 101 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 HSPA13P48723 471 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 CRYBB1P53674 252 aaPredicted RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 IFI35P80217 286 aaPredicted RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 SMAD3P84022 425 aaKnown RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 PAGE2BQ5JRK9 111 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 HYIQ5T013 277 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 IZUMO2Q6UXV1 221 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 SAPCD2Q86UD0 394 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 DHFR2Q86XF0 187 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 PSTKQ8IV42 348 aaKnown RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 FAM9CQ8IZT9 166 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 C19orf18Q8NEA5 215 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 DUSP9Q99956 384 aaKnown RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 IMP3Q9NV31 184 aaKnown RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 A0A088AWK7 358 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 ANXA5P08758 320 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 ZNF10P21506 573 aaPredicted RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 SCTRP47872 440 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 STX4Q12846 297 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 PRCCQ92733 491 aaPredicted RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 RNFT2Q96EX2 444 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 SNRNP25Q9BV90 132 aaKnown RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 PRKD2Q9BZL6 878 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 FGF10O15520 208 aaPredicted RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 PAICSP22234 425 aaKnown RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 INHBEP58166 350 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 CYP4F2P78329 520 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 ZNHIT3Q15649 155 aaPredicted RBP11.32□□□□□ -0.6
LINC00346-201ENST00000538077 C1orf186Q6ZWK4 172 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 ANKS1BQ7Z6G8 1248 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 IZUMO1Q8IYV9 350 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 SEMA3CQ99985 751 aa11.32□□□□□ -0.6
LINC00346-201ENST00000538077 TMEM191CA6NGB0 347 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 SLCO1B7G3V0H7 640 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 TRIM13O60858 407 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 PEX11AO75192 247 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 PSMD10O75832 226 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 SERPINE1P05121 402 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 MAGEA10P43363 369 aaPredicted RBP11.31□□□□□ -0.6
LINC00346-201ENST00000538077 ZSWIM7Q19AV6 140 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 PCDH20Q8N6Y1 951 aaKnown RBP11.31□□□□□ -0.6
LINC00346-201ENST00000538077 NAT9Q9BTE0 207 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 FTHL17Q9BXU8 183 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 POLR1BQ9H9Y6 1135 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 SLC28A3Q9HAS3 691 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 ZMYND8Q9ULU4 1186 aaPredicted RBP11.31□□□□□ -0.6
LINC00346-201ENST00000538077 MRASO14807 208 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 PAPSS1O43252 624 aaPredicted RBP11.31□□□□□ -0.6
LINC00346-201ENST00000538077 TLX1P31314 330 aaPredicted RBP11.31□□□□□ -0.6
LINC00346-201ENST00000538077 GNA13Q14344 377 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 PARP6Q2NL67 630 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 STXBP5Q5T5C0 1151 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 FAM45BPQ6NSW5 357 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 ZNF544Q6NX49 715 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 PIGZQ86VD9 579 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 KYQ8NBH2 561 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 OXNAD1Q96HP4 312 aaPredicted RBP11.31□□□□□ -0.6
LINC00346-201ENST00000538077 PRRG3Q9BZD7 231 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 TNKS2Q9H2K2 1166 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 TOR4AQ9NXH8 423 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 ZNF862O60290 1169 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 EIF4BP23588 611 aaKnown RBP11.31□□□□□ -0.6
LINC00346-201ENST00000538077 FKBP1AP62942 108 aaKnown RBP11.31□□□□□ -0.6
LINC00346-201ENST00000538077 GCNT1Q02742 428 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 INAQ16352 499 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 ZNF57Q68EA5 555 aaPredicted RBP11.31□□□□□ -0.6
LINC00346-201ENST00000538077 DCLRE1AQ6PJP8 1040 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 SNX32Q86XE0 403 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 OR5B17Q8NGF7 314 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 GDPD5Q8WTR4 605 aa11.31□□□□□ -0.6
LINC00346-201ENST00000538077 NMD3Q96D46 503 aaKnown RBP11.31□□□□□ -0.6
LINC00346-201ENST00000538077 NSMCE2Q96MF7 247 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms