RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 CBWD2Q8IUF1 395 aa9.71□□□□□ -0.86
CPSF7-217ENST00000537162 APLFQ8IW19 511 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-217ENST00000537162 NRSN1Q8IZ57 195 aa9.71□□□□□ -0.86
CPSF7-217ENST00000537162 CFAP52Q8N1V2 620 aa9.71□□□□□ -0.86
CPSF7-217ENST00000537162 CISD2Q8N5K1 135 aaKnown RBP9.71□□□□□ -0.86
CPSF7-217ENST00000537162 RBMXL3Q8N7X1 1067 aaKnown RBP9.71□□□□□ -0.86
CPSF7-217ENST00000537162 WASF1Q92558 559 aa9.71□□□□□ -0.86
CPSF7-217ENST00000537162 RTP4Q96DX8 246 aa9.71□□□□□ -0.86
CPSF7-217ENST00000537162 TNIP3Q96KP6 325 aa9.71□□□□□ -0.86
CPSF7-217ENST00000537162 TBATAQ96M53 351 aa9.71□□□□□ -0.86
CPSF7-217ENST00000537162 CDK5RAP1Q96SZ6 601 aaKnown RBP9.71□□□□□ -0.86
CPSF7-217ENST00000537162 EFHD1Q9BUP0 239 aa9.71□□□□□ -0.86
CPSF7-217ENST00000537162 AKAP7Q9P0M2 348 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-217ENST00000537162 COPG2Q9UBF2 871 aa9.71□□□□□ -0.86
CPSF7-217ENST00000537162 DOLKQ9UPQ8 538 aa9.71□□□□□ -0.86
CPSF7-217ENST00000537162 ATRQ13535 2644 aa9.71□□□□□ -0.86
CPSF7-217ENST00000537162 ZSCAN5CA6NGD5 496 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-217ENST00000537162 C1QTNF3-AMACRE9PGA6 284 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 HGSO14964 777 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-217ENST00000537162 BNIP3LO60238 219 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 PFKFB2O60825 505 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 MAP3K6O95382 1288 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 LDHAP00338 332 aaKnown RBP9.7□□□□□ -0.86
CPSF7-217ENST00000537162 COX6B1P14854 86 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 GLB1P16278 677 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 PSMA5P28066 241 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 STAT5AP42229 794 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 ART1P52961 327 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 ITGA1P56199 1179 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 OR1D5P58170 312 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 ZNF445P59923 1031 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 YWHAGP61981 247 aaKnown RBP eCLIP9.7□□□□□ -0.86
CPSF7-217ENST00000537162 LTBQ06643 244 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 CDK18Q07002 472 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 DCAF12Q5T6F0 453 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 KCTD16Q68DU8 428 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 Q71RC1 249 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-217ENST00000537162 BHLHA9Q7RTU4 235 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 BMPERQ8N8U9 685 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 ZNF516Q92618 1163 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 SLC25A23Q9BV35 468 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 RAB34Q9BZG1 259 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 TMEM9Q9P0T7 183 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 LRIT1Q9P2V4 623 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 STAB1Q9NY15 2570 aa9.7□□□□□ -0.86
CPSF7-217ENST00000537162 FN1P02751 2386 aaKnown RBP9.7□□□□□ -0.86
CPSF7-217ENST00000537162 COL6A5A8TX70 2615 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 FPGTO14772 594 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 MCF2LO15068 1137 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 KIF20AO95235 890 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 CPNE6O95741 557 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 SLFN14P0C7P3 912 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 CD44P16070 742 aaKnown RBP9.69□□□□□ -0.86
CPSF7-217ENST00000537162 ZNF18P17022 549 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 GARTP22102 1010 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 TOB1P50616 345 aaPredicted RBP9.69□□□□□ -0.86
CPSF7-217ENST00000537162 CASP5P51878 434 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 DPYDQ12882 1025 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 ELOAQ14241 798 aaKnown RBP9.69□□□□□ -0.86
CPSF7-217ENST00000537162 MCM6Q14566 821 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 SKOR2Q2VWA4 1001 aaPredicted RBP9.69□□□□□ -0.86
CPSF7-217ENST00000537162 PAPD7Q5XG87 772 aaKnown RBP9.69□□□□□ -0.86
CPSF7-217ENST00000537162 LVRNQ6Q4G3 990 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 FAM129CQ86XR2 697 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 WDR49Q8IV35 697 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 CRYBG2Q8N1P7 616 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 GPD1LQ8N335 351 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 NECAB1Q8N987 351 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 OR6C4Q8NGE1 309 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 TSACCQ96A04 125 aaPredicted RBP9.69□□□□□ -0.86
CPSF7-217ENST00000537162 TWNKQ96RR1 684 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 FGFBP2Q9BYJ0 223 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 ASPSCR1Q9BZE9 553 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 APMAPQ9HDC9 416 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 BLOC1S4Q9NUP1 217 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 TBC1D7Q9P0N9 293 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 OSGIN2Q9Y236 505 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 NTNG1Q9Y2I2 539 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 RPS6KL1Q9Y6S9 549 aa9.69□□□□□ -0.86
CPSF7-217ENST00000537162 A6NCN8 305 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 KPNA3O00505 521 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-217ENST00000537162 WIPF1O43516 503 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 STK17BO94768 372 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 LATS1O95835 1130 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 DLGAP3O95886 979 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 ADRA1BP35368 520 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 DLSTP36957 453 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 CCL11P51671 97 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 LIMK2P53671 638 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 PER3P56645 1201 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 PPARDQ03181 441 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 CDH18Q13634 790 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 PLEKHN1Q494U1 663 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-217ENST00000537162 ACCSLQ4AC99 568 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 L1TD1Q5T7N2 865 aaKnown RBP9.68□□□□□ -0.86
CPSF7-217ENST00000537162 HID1Q8IV36 788 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 FSTL5Q8N475 847 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-217ENST00000537162 HJURPQ8NCD3 748 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-217ENST00000537162 AGBL5Q8NDL9 886 aa9.68□□□□□ -0.86
CPSF7-217ENST00000537162 SCG3Q8WXD2 468 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms