RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 RYBPQ8N488 228 aaPredicted RBP16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 CCDC185Q8N715 623 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 TMEM145Q8NBT3 493 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 C3orf20Q8ND61 904 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 AGPAT1Q99943 283 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 MAGEH1Q9H213 219 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 TMEM248Q9NWD8 314 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 CA5BQ9Y2D0 317 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 WASF2Q9Y6W5 498 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 DSPP15924 2871 aaKnown RBP16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 PTPRBP23467 1997 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 PLXNB3Q9ULL4 1909 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 SIGLEC16A6NMB1 481 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 FAM72CH0Y354 149 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 RAMP2O60895 175 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 CAPNS1P04632 268 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 C1SP09871 688 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 THEGLP0DJG4 465 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 ADRB3P13945 408 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 HNRNPA2B1P22626 353 aaKnown RBP16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 ITGB7P26010 798 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 CCNHP51946 323 aaPredicted RBP16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 C1QBPQ07021 282 aaKnown RBP16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 ACACAQ13085 2346 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 POLD3Q15054 466 aaPredicted RBP16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 FAM72AQ5TYM5 149 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 FAM72DQ6L9T8 149 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 DNAJC24Q6P3W2 148 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 WDR59Q6PJI9 974 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 SLFN11Q7Z7L1 901 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 FAM72BQ86X60 149 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 ARHGEF2Q92974 986 aaKnown RBP16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 NTAN1Q96AB6 310 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 ISG20Q96AZ6 181 aaKnown RBP16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 TM6SF2Q9BZW4 377 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 NAT10Q9H0A0 1025 aaKnown RBP16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 ZDHHC6Q9H6R6 413 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 NDFIP2Q9NV92 336 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 HECAQ9UBI9 543 aaPredicted RBP16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 ACTL7AQ9Y615 435 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 ZFYVE26Q68DK2 2539 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 KNTC1P50748 2209 aa16.49■□□□□ 0.23
CLSTN3-204ENST00000535313 COL5A1P20908 1838 aaPredicted RBP16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 FAM149AA5PLN7 773 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 RNF103O00237 685 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 TAF4O00268 1085 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 RFPL3O75679 317 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 FERP16591 822 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 DESP17661 470 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 L1CAMP32004 1257 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 RPS21P63220 83 aaKnown RBP16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 DNAJC3Q13217 504 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 NCAPHQ15003 741 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 EFHC2Q5JST6 749 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 SFMBT2Q5VUG0 894 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 SEL1L3Q68CR1 1132 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 KIAA1161Q6NSJ0 714 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 SCYL2Q6P3W7 929 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 MON1BQ7L1V2 547 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 TMPRSS12Q86WS5 348 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 ZNF354CQ86Y25 554 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 MARCH9Q86YJ5 346 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 PLPP6Q8IY26 295 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 AOPEPQ8N6M6 819 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 FEM1CQ96JP0 617 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 FZD3Q9NPG1 666 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 ZFR2Q9UPR6 939 aaKnown RBP16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 DOCK9Q9BZ29 2069 aa16.48■□□□□ 0.23
CLSTN3-204ENST00000535313 APC2O95996 2303 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 ZSCAN5CA6NGD5 496 aaPredicted RBP16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 SDC3O75056 442 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 CD160O95971 181 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 ZNF143P52747 638 aaPredicted RBP16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 SNRPD1P62314 119 aaKnown RBP16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 TYRO3Q06418 890 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 TMEM259Q4ZIN3 620 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 DCUN1D2Q6PH85 259 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 APTXQ7Z2E3 356 aaKnown RBP16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 FAM174AQ8TBP5 190 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 MDM1Q8TC05 714 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 LRIG1Q96JA1 1093 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 MCEEQ96PE7 176 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 CALN1Q9BXU9 219 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 MAGEB5Q9BZ81 275 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 HSD3B7Q9H2F3 369 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 KLHL11Q9NVR0 708 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 RALYQ9UKM9 306 aaKnown RBP16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 NEU3Q9UQ49 428 aa16.47■□□□□ 0.23
CLSTN3-204ENST00000535313 TRABD2BA6NFA1 517 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 NEMP1O14524 444 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 CCP110O43303 1012 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 KDELR3O43731 214 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 AP1G1O43747 822 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 GSRP00390 522 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 ATP1A3P13637 1013 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 JUPP14923 745 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 CKMT2P17540 419 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 EPHB2P29323 1055 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 HNF1BP35680 557 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms