RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 Q6ZSN1 163 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 CATSPER3Q86XQ3 398 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 CACUL1Q86Y37 369 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 SMC5Q8IY18 1101 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 EID2Q8N6I1 236 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 ZNF713Q8N859 430 aaPredicted RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 IL17DQ8TAD2 202 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 BICD2Q8TD16 824 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 IPO4Q8TEX9 1081 aaKnown RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 CCDC12Q8WUD4 166 aaPredicted RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 RUFY2Q8WXA3 655 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 DNASE2BQ8WZ79 361 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 MRPS31Q92665 395 aaKnown RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 NXPE2Q96DL1 559 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 WBP1Q96G27 269 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 P2RY11Q96G91 374 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 C1orf159Q96HA4 380 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 MRGPRX1Q96LB2 322 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 FAM20AQ96MK3 541 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 GCNAQ96QF7 691 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 LGMNQ99538 433 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 CCDC94Q9BW85 323 aaPredicted RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 ZCWPW1Q9H0M4 648 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 EPN3Q9H201 632 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 CDIP1Q9H305 208 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 FAM124BQ9H5Z6 455 aaPredicted RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 SLC38A7Q9NVC3 462 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 WSB2Q9NYS7 404 aaPredicted RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 TNFSF13BQ9Y275 285 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 MAN2B2Q9Y2E5 1009 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 TMA7Q9Y2S6 64 aaKnown RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 HEMK1Q9Y5R4 338 aaPredicted RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 SLC30A1Q9Y6M5 507 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 PI4KAP42356 2102 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 NID2Q14112 1375 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 OTOGQ6ZRI0 2925 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 TRAV19A0A0A6YYK7 116 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 A0A1W2PNU3 283 aaPredicted RBP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 TLDC2A0PJX2 215 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 BLACEA4D250 179 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 CAPN8A6NHC0 703 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 CCDC169A6NNP5 214 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 K7ERI5 159 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 CYB561D2O14569 222 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 WNT9AO14904 365 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 CASC3O15234 703 aaKnown RBP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 FLRT2O43155 660 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 KLF4O43474 513 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 DLX3O60479 287 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 RAMP2O60895 175 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 ATP2C2O75185 946 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 TULP3O75386 442 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 GJB6O95452 261 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 CXCL8P10145 99 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 CYP11B2P19099 503 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 TYMPP19971 482 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 ACAT1P24752 427 aaKnown RBP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 DDX6P26196 483 aaKnown RBP eCLIP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 PDIA3P30101 505 aaKnown RBP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 CD6P30203 668 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 LRPAP1P30533 357 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 ADCY8P40145 1251 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 DPP6P42658 865 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 AARSP49588 968 aaKnown RBP eCLIP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 MEOX1P50221 254 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 PEX3P56589 373 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 RESTQ13127 1097 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 SRSF6Q13247 344 aaKnown RBP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 ZBTB6Q15916 424 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 TBC1D25Q3MII6 688 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 C10orf76Q5T2E6 689 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 SYCP2LQ5T4T6 812 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 MRM1Q6IN84 353 aaKnown RBP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 PPP4R3AQ6IN85 833 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 PIK3AP1Q6ZUJ8 805 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 USP30Q70CQ3 517 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 MRGPRGQ86SM5 289 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 SKAP1Q86WV1 359 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 PTRH1Q86Y79 214 aaKnown RBP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 TMEM25Q86YD3 366 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 SCN4BQ8IWT1 228 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 CHPFQ8IZ52 775 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 ZNF483Q8TF39 744 aaPredicted RBP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 SNX19Q92543 992 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 EXOC4Q96A65 974 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 CLIP3Q96DZ5 547 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 CNDP2Q96KP4 475 aaKnown RBP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 CCDC43Q96MW1 224 aaKnown RBP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 CD244Q9BZW8 370 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 ZDHHC5Q9C0B5 715 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 C2orf40Q9H1Z8 148 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 TMEM60Q9H2L4 133 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 RWDD1Q9H446 243 aaPredicted RBP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 C6orf106Q9H6K1 298 aaPredicted RBP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 KIF9Q9HAQ2 790 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 ITM2CQ9NQX7 267 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 ST7Q9NRC1 585 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 TOPORSQ9NS56 1045 aaPredicted RBP3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 CFAP97Q9P2B7 532 aa3.16□□□□□ -1.9
CHMP4A-208ENST00000534106 GTF3C4Q9UKN8 822 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms