RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.56■□□□□ 0.4
PHRF1-204ENST00000532550 HDAC8Q9BY41 377 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 MRPL47Q9HD33 250 aaKnown RBP17.56■□□□□ 0.4
PHRF1-204ENST00000532550 DONSONQ9NYP3 566 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 ARHGAP20Q9P2F6 1191 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 NEU3Q9UQ49 428 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 DMTF1Q9Y222 760 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 ACTL7AQ9Y615 435 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 SCINQ9Y6U3 715 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 WASF2Q9Y6W5 498 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 CHD8Q9HCK8 2581 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 TMEM131Q92545 1883 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 ZSCAN5CA6NGD5 496 aaPredicted RBP17.55■□□□□ 0.4
PHRF1-204ENST00000532550 H0Y8X5 98 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 WNT9AO14904 365 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 FGF10O15520 208 aaPredicted RBP17.55■□□□□ 0.4
PHRF1-204ENST00000532550 FLRT2O43155 660 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 BUB1O43683 1085 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 RNGTTO60942 597 aaKnown RBP17.55■□□□□ 0.4
PHRF1-204ENST00000532550 PCDH8O95206 1070 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 TRIM16O95361 564 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 WNT1P04628 370 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 MYBL1P10243 752 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 PBX1P40424 430 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 CCT8P50990 548 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 CCNHP51946 323 aaPredicted RBP17.55■□□□□ 0.4
PHRF1-204ENST00000532550 YBEYP58557 167 aaPredicted RBP17.55■□□□□ 0.4
PHRF1-204ENST00000532550 TAS2R38P59533 333 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 SNRPD1P62314 119 aaKnown RBP17.55■□□□□ 0.4
PHRF1-204ENST00000532550 ZBED6P86452 979 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 ERMARDQ5T6L9 678 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 LEKR1Q6ZMV7 388 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 VPS36Q86VN1 386 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 TM6SF2Q9BZW4 377 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 ISCUQ9H1K1 167 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 IFNKQ9P0W0 207 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 MYO1AQ9UBC5 1043 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 PCSK1NQ9UHG2 260 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 PCOLCE2Q9UKZ9 415 aa17.55■□□□□ 0.4
PHRF1-204ENST00000532550 LUC7L2Q9Y383 392 aaKnown RBP17.55■□□□□ 0.4
PHRF1-204ENST00000532550 A0A1W2PR77 199 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 WASH4PA8MWX3 477 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 TLR4O00206 839 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 DAPK3O43293 454 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 PRPSAP2O60256 369 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 MAGEC1O60732 1142 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 CBFA2T3O75081 653 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 SERPING1P05155 500 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 TPM3P06753 285 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 HTR7P34969 479 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 TPI1P60174 286 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 PRAMEF14Q5SWL7 426 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 FBXL19Q6PCT2 694 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 MFSD2AQ8NA29 543 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 FNIP1Q8TF40 1166 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 LRIG1Q96JA1 1093 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 ELF4Q99607 663 aaPredicted RBP17.54■□□□□ 0.4
PHRF1-204ENST00000532550 CDC6Q99741 560 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 NCAPGQ9BPX3 1015 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 DHX35Q9H5Z1 703 aaKnown RBP17.54■□□□□ 0.4
PHRF1-204ENST00000532550 ZDHHC6Q9H6R6 413 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 GDF3Q9NR23 364 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 CAPN11Q9UMQ6 739 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 AP4E1Q9UPM8 1137 aa17.54■□□□□ 0.4
PHRF1-204ENST00000532550 A0A1W2PQU0 124 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 EIF3CLB5ME19 914 aaKnown RBP17.53■□□□□ 0.4
PHRF1-204ENST00000532550 RASA4BC9J798 803 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 PRAMEF26H0Y7S4 382 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 RNF103O00237 685 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 EEF2KO00418 725 aaKnown RBP17.53■□□□□ 0.4
PHRF1-204ENST00000532550 RASA4O43374 803 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 PCDHGA12O60330 932 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 POP4O95707 220 aaKnown RBP17.53■□□□□ 0.4
PHRF1-204ENST00000532550 GSRP00390 522 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 ITGB7P26010 798 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 NEK3P51956 506 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 MYLK3Q32MK0 819 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 PARP15Q460N3 678 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 HGSNATQ68CP4 663 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 HORMAD1Q86X24 394 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 UMODL1-AS1Q8N2C9 162 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 OR2AP1Q8NGE2 309 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 CASKIN2Q8WXE0 1202 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 EIF3CQ99613 913 aaKnown RBP17.53■□□□□ 0.4
PHRF1-204ENST00000532550 SCNM1Q9BWG6 230 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 NOL6Q9H6R4 1146 aaKnown RBP17.53■□□□□ 0.4
PHRF1-204ENST00000532550 GPATCH2LQ9NWQ4 482 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 APOBEC2Q9Y235 224 aaKnown RBP17.53■□□□□ 0.4
PHRF1-204ENST00000532550 TRPM6Q9BX84 2022 aa17.53■□□□□ 0.4
PHRF1-204ENST00000532550 A0A1B0GTQ1 180 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 KRIT1O00522 736 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 SLC31A1O15431 190 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 TOP3BO95985 862 aaKnown RBP17.52■□□□□ 0.4
PHRF1-204ENST00000532550 SPINK2P20155 84 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 MIPP30301 263 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 GRK6P43250 576 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 ARRB1P49407 418 aaPredicted RBP17.52■□□□□ 0.4
PHRF1-204ENST00000532550 IL9RQ01113 521 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 RAD51Q06609 339 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 OVGP1Q12889 678 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms