RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 OR2W6PQ8NHA6 318 aa22.32■■□□□ 1.16
PACSIN3-209ENST00000532457 FGF14Q92915 247 aa22.32■■□□□ 1.16
PACSIN3-209ENST00000532457 ZIM3Q96PE6 472 aa22.32■■□□□ 1.16
PACSIN3-209ENST00000532457 BBS2Q9BXC9 721 aa22.32■■□□□ 1.16
PACSIN3-209ENST00000532457 PLA2G2FQ9BZM2 168 aa22.32■■□□□ 1.16
PACSIN3-209ENST00000532457 VIPAS39Q9H9C1 493 aa22.32■■□□□ 1.16
PACSIN3-209ENST00000532457 EIF2B3Q9NR50 452 aaKnown RBP22.32■■□□□ 1.16
PACSIN3-209ENST00000532457 DUS2Q9NX74 493 aaKnown RBP22.32■■□□□ 1.16
PACSIN3-209ENST00000532457 RIPK2O43353 540 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 USP12O75317 370 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 MMP2P08253 660 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 MAGEA3P43357 314 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 IFNAR2P48551 515 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 HTR4Q13639 388 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 SLC29A2Q14542 456 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 EML3Q32P44 896 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 BBS9Q3SYG4 887 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 TMCO4Q5TGY1 634 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 CENPUQ71F23 418 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 KIAA1958Q8N8K9 716 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 UHMK1Q8TAS1 419 aaKnown RBP22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 BPIFB1Q8TDL5 484 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 NSMCE3Q96MG7 304 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 THG1LQ9NWX6 298 aaKnown RBP22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 VPS28Q9UK41 221 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 TRIM24O15164 1050 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 AP2A1O95782 977 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 TTC4O95801 387 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 MT-CO1P00395 513 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 SHBGP04278 402 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 TYRP14679 529 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 HLA-FP30511 346 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 LMAN1P49257 510 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 DSC2Q02487 901 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 DHCR24Q15392 516 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 TJAP1Q5JTD0 557 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 MFSD6LQ8IWD5 586 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 ZBED8Q8IZ13 594 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 MPP5Q8N3R9 675 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 ARRDC2Q8TBH0 407 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 OSCP1Q8WVF1 389 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 OTUB2Q96DC9 234 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 ZNF599Q96NL3 588 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 KCNK12Q9HB15 430 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 KIAA1522Q9P206 1035 aaPredicted RBP22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 VPS51Q9UID3 782 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 PLAAQ9Y263 795 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 NUMBLQ9Y6R0 609 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 A0A0C4DFX4 3053 aa22.31■■□□□ 1.16
PACSIN3-209ENST00000532457 OTOL1A6NHN0 477 aaPredicted RBP22.3■■□□□ 1.16
PACSIN3-209ENST00000532457 SUN1O94901 812 aa22.3■■□□□ 1.16
PACSIN3-209ENST00000532457 ARSAP15289 507 aa22.3■■□□□ 1.16
PACSIN3-209ENST00000532457 PSMC3P17980 439 aa22.3■■□□□ 1.16
PACSIN3-209ENST00000532457 CDK16Q00536 496 aa22.3■■□□□ 1.16
PACSIN3-209ENST00000532457 TRMT10CQ7L0Y3 403 aaKnown RBP22.3■■□□□ 1.16
PACSIN3-209ENST00000532457 YAF2Q8IY57 180 aa22.3■■□□□ 1.16
PACSIN3-209ENST00000532457 PDIK1LQ8N165 341 aa22.3■■□□□ 1.16
PACSIN3-209ENST00000532457 NAT16Q8N8M0 369 aa22.3■■□□□ 1.16
PACSIN3-209ENST00000532457 IMP4Q96G21 291 aaKnown RBP22.3■■□□□ 1.16
PACSIN3-209ENST00000532457 SLC25A51Q9H1U9 297 aa22.3■■□□□ 1.16
PACSIN3-209ENST00000532457 ABCB8Q9NUT2 735 aa22.3■■□□□ 1.16
PACSIN3-209ENST00000532457 UBA2Q9UBT2 640 aaPredicted RBP22.3■■□□□ 1.16
PACSIN3-209ENST00000532457 SLC9A3R1O14745 358 aaPredicted RBP22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 ACSL3O95573 720 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 CYP17A1P05093 508 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 RGRP47804 291 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 ITKQ08881 620 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 CFAP58Q5T655 872 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 LRRC8BQ6P9F7 803 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 VITQ6UXI7 678 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 OR52K1Q8NGK4 314 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 NSMCE1Q8WV22 266 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 SIGLEC10Q96LC7 697 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 KXD1Q9BQD3 176 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 APOL2Q9BQE5 337 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 MARK1Q9P0L2 795 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 TEX264Q9Y6I9 313 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 C19orf67A6NJJ6 358 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 K7ERQ8 282 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 AGTP01019 485 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 ELK3P41970 407 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 PLK1P53350 603 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 GPX6P59796 221 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 SPDYCQ5MJ68 293 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 ALS2CLQ60I27 953 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 TADA1Q96BN2 335 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 FAM83CQ9BQN1 747 aa22.29■■□□□ 1.16
PACSIN3-209ENST00000532457 EIF3HO15372 352 aaKnown RBP eCLIP22.28■■□□□ 1.16
PACSIN3-209ENST00000532457 NEBLO76041 1014 aa22.28■■□□□ 1.16
PACSIN3-209ENST00000532457 FAM193AP78312 1265 aa22.28■■□□□ 1.16
PACSIN3-209ENST00000532457 FCHO2Q0JRZ9 810 aa22.28■■□□□ 1.16
PACSIN3-209ENST00000532457 PLEKHG6Q3KR16 790 aa22.28■■□□□ 1.16
PACSIN3-209ENST00000532457 KDELC1Q6UW63 502 aa22.28■■□□□ 1.16
PACSIN3-209ENST00000532457 FBXO36Q8NEA4 188 aa22.28■■□□□ 1.16
PACSIN3-209ENST00000532457 TRIM56Q9BRZ2 755 aaKnown RBP22.28■■□□□ 1.16
PACSIN3-209ENST00000532457 RPP25Q9BUL9 199 aaKnown RBP22.28■■□□□ 1.16
PACSIN3-209ENST00000532457 EBF3Q9H4W6 596 aa22.28■■□□□ 1.16
PACSIN3-209ENST00000532457 PLAC1Q9HBJ0 212 aa22.28■■□□□ 1.16
PACSIN3-209ENST00000532457 PMPCBO75439 489 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms