RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 MAGED2Q9UNF1 606 aaPredicted RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 POMPQ9Y244 141 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 ACOT9Q9Y305 439 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 TCAF1Q9Y4C2 921 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 MYADML2A6NDP7 307 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 GOLGA8TH3BQL2 631 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 B3GAT3O94766 335 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 ARNTP27540 789 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 CCR1P32246 355 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 RAB10P61026 200 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 TBL3Q12788 808 aaKnown RBP17.08■□□□□ 0.33
VPS26B-206ENST00000531741 CUL3Q13618 768 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 OR52E8Q6IFG1 317 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 GDF6Q6KF10 455 aaPredicted RBP17.08■□□□□ 0.33
VPS26B-206ENST00000531741 LRRC8EQ6NSJ5 796 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 IZUMO2Q6UXV1 221 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 SETD3Q86TU7 594 aaPredicted RBP17.08■□□□□ 0.33
VPS26B-206ENST00000531741 FSTL5Q8N475 847 aaPredicted RBP17.08■□□□□ 0.33
VPS26B-206ENST00000531741 ZNF419Q96HQ0 510 aaPredicted RBP17.08■□□□□ 0.33
VPS26B-206ENST00000531741 VCX3BQ9H321 246 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 MAN1C1Q9NR34 630 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 TREX1Q9NSU2 369 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 PRPF19Q9UMS4 504 aaKnown RBP17.08■□□□□ 0.33
VPS26B-206ENST00000531741 SSX2IPQ9Y2D8 614 aa17.08■□□□□ 0.33
VPS26B-206ENST00000531741 ARHGEF37A1IGU5 675 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 PAGE1O75459 146 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 SKAP2O75563 359 aaPredicted RBP17.08■□□□□ 0.32
VPS26B-206ENST00000531741 BAG2O95816 211 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 MT-CYBP00156 380 aaPredicted RBP17.08■□□□□ 0.32
VPS26B-206ENST00000531741 CHRNGP07510 517 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 PAMP19021 973 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 TFEBP19484 476 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 MPSTP25325 297 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 EPHB1P54762 984 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 GRIK3Q13003 919 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 CDC16Q13042 620 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 ARL13AQ5H913 290 aaPredicted RBP17.08■□□□□ 0.32
VPS26B-206ENST00000531741 KIAA0930Q6ICG6 404 aaPredicted RBP17.08■□□□□ 0.32
VPS26B-206ENST00000531741 C2CD4AQ8NCU7 369 aaPredicted RBP17.08■□□□□ 0.32
VPS26B-206ENST00000531741 OR10T2Q8NGX3 314 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 USP33Q8TEY7 942 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 UROC1Q96N76 676 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 GPR78Q96P69 363 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 PRKD2Q9BZL6 878 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 ZNF385DQ9H6B1 395 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 DLGAP2Q9P1A6 1054 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 VPS28Q9UK41 221 aa17.08■□□□□ 0.32
VPS26B-206ENST00000531741 RUVBL2Q9Y230 463 aaKnown RBP17.08■□□□□ 0.32
VPS26B-206ENST00000531741 LOC100653049A0A140TA62 436 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 RGSL1A5PLK6 1076 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 WASH4PA8MWX3 477 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 PHGDHO43175 533 aaKnown RBP17.07■□□□□ 0.32
VPS26B-206ENST00000531741 GRID2O43424 1007 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 KRT34O76011 436 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 CELF2O95319 508 aaKnown RBP17.07■□□□□ 0.32
VPS26B-206ENST00000531741 PIGNO95427 931 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 TUBP50607 506 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 HERC3Q15034 1050 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 C17orf99Q6UX52 265 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 RANBP10Q6VN20 620 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 ACAD11Q709F0 780 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 TMC7Q7Z402 723 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 LRRTM3Q86VH5 581 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 IPMKQ8NFU5 416 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 RP9Q8TA86 221 aaKnown RBP17.07■□□□□ 0.32
VPS26B-206ENST00000531741 SHKBP1Q8TBC3 707 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 KCTD4Q8WVF5 259 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 IFT43Q96FT9 208 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 LENG8Q96PV6 779 aaPredicted RBP17.07■□□□□ 0.32
VPS26B-206ENST00000531741 FICDQ9BVA6 458 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 SLC39A8Q9C0K1 460 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 SIK2Q9H0K1 926 aa17.07■□□□□ 0.32
VPS26B-206ENST00000531741 AGO3Q9H9G7 860 aaKnown RBP17.07■□□□□ 0.32
VPS26B-206ENST00000531741 A0A087X1B8 175 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 EIF4E1BA6NMX2 242 aaKnown RBP17.06■□□□□ 0.32
VPS26B-206ENST00000531741 NPHS1O60500 1241 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 PDE5AO76074 875 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 VAPBO95292 243 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 CTSHP09668 335 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 STMN1P16949 149 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 TYMPP19971 482 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 PIK3R1P27986 724 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 SERPINB5P36952 375 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 BRCC3P46736 316 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 KPNA2P52292 529 aaKnown RBP17.06■□□□□ 0.32
VPS26B-206ENST00000531741 NSUN2Q08J23 767 aaKnown RBP eCLIP17.06■□□□□ 0.32
VPS26B-206ENST00000531741 TUSC3Q13454 348 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 DSC3Q14574 896 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 POU6F1Q14863 301 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 LSM12Q3MHD2 195 aaKnown RBP17.06■□□□□ 0.32
VPS26B-206ENST00000531741 GNASQ5JWF2 1037 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 BTBD8Q5XKL5 378 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 OVOS1Q6IE37 1185 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 KIAA0408Q6ZU52 694 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 SLC41A1Q8IVJ1 513 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 THEM5Q8N1Q8 247 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 SCAMP5Q8TAC9 235 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 RSPH1Q8WYR4 309 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 FATE1Q969F0 183 aa17.06■□□□□ 0.32
VPS26B-206ENST00000531741 PPP2R3CQ969Q6 453 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms