RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 FHOD1Q9Y613 1164 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 U3KQA8 63 aa18.8■□□□□ 0.6
SSSCA1-206ENST00000531405 ZNF462Q96JM2 2506 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 ILVBLA1L0T0 632 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 A6NNZ2 444 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 ATXN7O15265 892 aaPredicted RBP18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 OPA1O60313 960 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 PAK4O96013 591 aaPredicted RBP18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 MPOP05164 745 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 ADRB3P13945 408 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 CYP11B1P15538 503 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 SERPINH1P50454 418 aaKnown RBP18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 ARF5P84085 180 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 TLE3Q04726 772 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 DRAP1Q14919 205 aaPredicted RBP18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 TPD52L1Q16890 204 aaPredicted RBP18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 CDCP2Q5VXM1 449 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 FAM131BQ86XD5 332 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 SPACA3Q8IXA5 215 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 DRC7Q8IY82 874 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 NAF1Q96HR8 494 aaKnown RBP18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 SLC17A9Q9BYT1 436 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 OSBPL2Q9H1P3 480 aa18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 FCF1Q9Y324 198 aaKnown RBP18.79■□□□□ 0.6
SSSCA1-206ENST00000531405 FLNBO75369 2602 aaKnown RBP18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 K7ESM1 405 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 ALPPL2P10696 532 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 ITGB7P26010 798 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 CCNHP51946 323 aaPredicted RBP18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 BPIFB4P59827 614 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 RPS21P63220 83 aaKnown RBP18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 FZD2Q14332 565 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 RAB6CQ53S08 254 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 MIIPQ5JXC2 388 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 RETSATQ6NUM9 610 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 PARS2Q7L3T8 475 aaKnown RBP18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 HEPHQ9BQS7 1158 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 TM6SF2Q9BZW4 377 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 RAB6CQ9H0N0 254 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 NDST4Q9H3R1 872 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 ZDHHC6Q9H6R6 413 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 ASH1LQ9NR48 2969 aaKnown RBP18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 GPR27Q9NS67 375 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 FADS3Q9Y5Q0 445 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 HS3ST3A1Q9Y663 406 aa18.78■□□□□ 0.6
SSSCA1-206ENST00000531405 ANKRD36A6QL64 1941 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 SCAMP1O15126 338 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 USP12O75317 370 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 CSO75390 466 aaKnown RBP18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 PRKCSHP14314 528 aaPredicted RBP18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 L1CAMP32004 1257 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 GKP32189 559 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 ACVRL1P37023 503 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 SCNN1AP37088 669 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 CXADRP78310 365 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 GABREP78334 506 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 GNA12Q03113 381 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 C19orf57Q0VDD7 668 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 VWA3BQ502W6 1294 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 CARD16Q5EG05 197 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 TPRG1LQ5T0D9 272 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 KIAA1161Q6NSJ0 714 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 KYAT3Q6YP21 454 aaKnown RBP18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 ZNF783Q6ZMS7 281 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 BNIPLQ7Z465 357 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 NOP9Q86U38 636 aaKnown RBP18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 PCDH20Q8N6Y1 951 aaKnown RBP18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 ZNF548Q8NEK5 533 aaPredicted RBP18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 OR6K2Q8NGY2 324 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 CPA5Q8WXQ8 436 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 IFT43Q96FT9 208 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 DEPDC7Q96QD5 511 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 HAPLN3Q96S86 360 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 LGMNQ99538 433 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 ZYG11BQ9C0D3 744 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 CEP44Q9C0F1 390 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 KLF15Q9UIH9 416 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 GGT7Q9UJ14 662 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 TMEM59LQ9UK28 342 aa18.77■□□□□ 0.6
SSSCA1-206ENST00000531405 LRP4O75096 1905 aa18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 NEMP2A6NFY4 417 aa18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 CD160O95971 181 aa18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 HNRNPKP61978 463 aaKnown RBP eCLIP18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 ATP11AP98196 1134 aa18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 SMYD5Q6GMV2 418 aa18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 GPR155Q7Z3F1 870 aa18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 EMC1Q8N766 993 aa18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 MLKLQ8NB16 471 aa18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 IFI44Q8TCB0 444 aa18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 FEM1CQ96JP0 617 aa18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 TUBGCP2Q9BSJ2 902 aa18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 METTL5Q9NRN9 209 aaKnown RBP18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 NDFIP2Q9NV92 336 aa18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 ITM2BQ9Y287 266 aa18.76■□□□□ 0.59
SSSCA1-206ENST00000531405 SPTY2D1-AS1A0A0U1RR47 76 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 IGLON5A6NGN9 336 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 TK2O00142 265 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 CSF2P04141 144 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 MMEP08473 750 aa18.75■□□□□ 0.59
SSSCA1-206ENST00000531405 NME1P15531 152 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms