RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 RASGRP3Q8IV61 690 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 IGFBPL1Q8WX77 278 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 C18orf8Q96DM3 657 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 SGCZQ96LD1 299 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 MTMR4Q9NYA4 1195 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 HERC5Q9UII4 1024 aaKnown RBP7.75□□□□□ -1.17
CSDE1-213ENST00000530784 DTNAQ9Y4J8 743 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 LOC285556D6RIA3 1793 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 MYH2Q9UKX2 1941 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 CCER2I3L3R5 266 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 J3KTA2 159 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 PRYO14603 147 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 HNRNPDLO14979 420 aaKnown RBP7.74□□□□□ -1.17
CSDE1-213ENST00000530784 INPPL1O15357 1258 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 OS9Q13438 667 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-213ENST00000530784 RAB30Q15771 203 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 CCDC158Q5M9N0 1113 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 NAA16Q6N069 864 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-213ENST00000530784 ACSM6Q6P461 480 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 SHC4Q6S5L8 630 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 C16orf52Q8NHV5 167 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 PIGOQ8TEQ8 1089 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 AKAP1Q92667 903 aaKnown RBP eCLIP7.74□□□□□ -1.17
CSDE1-213ENST00000530784 FCRL5Q96RD9 977 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 EIF3CQ99613 913 aaKnown RBP7.74□□□□□ -1.17
CSDE1-213ENST00000530784 TMEM79Q9BSE2 394 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 RNF26Q9BY78 433 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-213ENST00000530784 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.74□□□□□ -1.17
CSDE1-213ENST00000530784 NECTIN3Q9NQS3 549 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 FSCN3Q9NQT6 498 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 ASNSD1Q9NWL6 643 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 AATFQ9NY61 560 aaKnown RBP eCLIP7.74□□□□□ -1.17
CSDE1-213ENST00000530784 TNNQ9UQP3 1299 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 FLT1P17948 1338 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 AK9Q5TCS8 1911 aa7.74□□□□□ -1.17
CSDE1-213ENST00000530784 PHIPQ8WWQ0 1821 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 CTIFO43310 598 aaKnown RBP7.73□□□□□ -1.17
CSDE1-213ENST00000530784 PLA2G6O60733 806 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 PLAUP00749 431 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 FGBP02675 491 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 ASNSP08243 561 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 ABCB4P21439 1286 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 MATN1P21941 496 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 IDUAP35475 653 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 KRTAP10-11P60412 298 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 IRX3P78415 501 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-213ENST00000530784 HSF1Q00613 529 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 C10orf25Q5T742 122 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 KYAT3Q6YP21 454 aaKnown RBP7.73□□□□□ -1.17
CSDE1-213ENST00000530784 OR52L2PQ8NGH6 319 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 DEPTORQ8TB45 409 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 FCRL4Q96PJ5 515 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 GPR108Q9NPR9 543 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 TM7SF3Q9NS93 570 aa7.73□□□□□ -1.17
CSDE1-213ENST00000530784 SIRT4Q9Y6E7 314 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-213ENST00000530784 MGAMO43451 1857 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 PTPRFP10586 1907 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-213ENST00000530784 A0A1W2PPC1 479 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 TTC34A8MYJ7 566 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 CTSAP10619 480 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 NDUFS1P28331 727 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 HOXD12P35452 270 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 BACE1P56817 501 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 RPS13P62277 151 aaKnown RBP7.72□□□□□ -1.17
CSDE1-213ENST00000530784 ID2Q02363 134 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 KRTAP1-1Q07627 177 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 STIM1Q13586 685 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 MSANTD2Q6P1R3 559 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 ADGRA1Q86SQ6 560 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 FAM186BQ8IYM0 893 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 TMEM57Q8N5G2 664 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 IPO4Q8TEX9 1081 aaKnown RBP7.72□□□□□ -1.17
CSDE1-213ENST00000530784 P2RY11Q96G91 374 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 GATA5Q9BWX5 397 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-213ENST00000530784 PRO3102Q9H379 93 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 CDCP1Q9H5V8 836 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 EPS8L2Q9H6S3 715 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 CHST12Q9NRB3 414 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 MORF4L1Q9UBU8 362 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 SLC39A10Q9ULF5 831 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 CA14Q9ULX7 337 aa7.72□□□□□ -1.17
CSDE1-213ENST00000530784 KIAA0100Q14667 2235 aaKnown RBP7.72□□□□□ -1.17
CSDE1-213ENST00000530784 C19orf81C9J6K1 198 aa7.71□□□□□ -1.18
CSDE1-213ENST00000530784 SURF6O75683 361 aaKnown RBP7.71□□□□□ -1.18
CSDE1-213ENST00000530784 SLC3A2P08195 630 aaKnown RBP7.71□□□□□ -1.18
CSDE1-213ENST00000530784 HOXA7P31268 230 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-213ENST00000530784 NR4A2P43354 598 aa7.71□□□□□ -1.18
CSDE1-213ENST00000530784 AGTR2P50052 363 aa7.71□□□□□ -1.18
CSDE1-213ENST00000530784 RBMS2Q15434 407 aaKnown RBP7.71□□□□□ -1.18
CSDE1-213ENST00000530784 EARS2Q5JPH6 523 aaKnown RBP7.71□□□□□ -1.18
CSDE1-213ENST00000530784 C16orf89Q6UX73 402 aa7.71□□□□□ -1.18
CSDE1-213ENST00000530784 DEF8Q6ZN54 512 aa7.71□□□□□ -1.18
CSDE1-213ENST00000530784 FOXP4Q8IVH2 680 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-213ENST00000530784 FTSJ3Q8IY81 847 aaKnown RBP7.71□□□□□ -1.18
CSDE1-213ENST00000530784 GPRC5AQ8NFJ5 357 aa7.71□□□□□ -1.18
CSDE1-213ENST00000530784 TRIB2Q92519 343 aa7.71□□□□□ -1.18
CSDE1-213ENST00000530784 PIGKQ92643 395 aa7.71□□□□□ -1.18
CSDE1-213ENST00000530784 ELOVL1Q9BW60 279 aa7.71□□□□□ -1.18
CSDE1-213ENST00000530784 STK33Q9BYT3 514 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms