RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 KIAA0930Q6ICG6 404 aaPredicted RBP15.56■□□□□ 0.08
USH1C-207ENST00000527720 RNF180Q86T96 592 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 WDR60Q8WVS4 1066 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 CMTM5Q96DZ9 223 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 NAF1Q96HR8 494 aaKnown RBP15.56■□□□□ 0.08
USH1C-207ENST00000527720 SLC25A51Q9H1U9 297 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 TASP1Q9H6P5 420 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 ARNT2Q9HBZ2 717 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 TREX1Q9NSU2 369 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 IPO11Q9UI26 975 aaKnown RBP15.56■□□□□ 0.08
USH1C-207ENST00000527720 SYN3O14994 580 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 MOCS2O96007 188 aaPredicted RBP15.56■□□□□ 0.08
USH1C-207ENST00000527720 OR4Q2P0C623 313 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 CKBP12277 381 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 CPOXP36551 454 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 VHLP40337 213 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 ABCG1P45844 678 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 SLC34A1Q06495 639 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 RCN1Q15293 331 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 CFAP157Q5JU67 520 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 ACBD5Q5T8D3 534 aaPredicted RBP15.56■□□□□ 0.08
USH1C-207ENST00000527720 NAPRTQ6XQN6 538 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 RTN4RL1Q86UN2 441 aaPredicted RBP15.56■□□□□ 0.08
USH1C-207ENST00000527720 ZNF280BQ86YH2 543 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 ULK2Q8IYT8 1036 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 ACVR1CQ8NER5 493 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 FBXO27Q8NI29 283 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 GABPB2Q8TAK5 448 aaPredicted RBP15.56■□□□□ 0.08
USH1C-207ENST00000527720 MRGPRX2Q96LB1 330 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 MYCBPQ99417 103 aaPredicted RBP15.56■□□□□ 0.08
USH1C-207ENST00000527720 FAM167BQ9BTA0 163 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 DRC3Q9H069 523 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 ILKAPQ9H0C8 392 aaPredicted RBP15.56■□□□□ 0.08
USH1C-207ENST00000527720 IL37Q9NZH6 218 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 GOLGA8TH3BQL2 631 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 B4GALT3O60512 393 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 VAPBO95292 243 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 SLC35E2BP0CK96 405 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 RHOQP17081 205 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 GABRB3P28472 473 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 CRABP2P29373 138 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 RENBPP51606 427 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 COPAP53621 1224 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 CLNS1AP54105 237 aaKnown RBP15.55■□□□□ 0.08
USH1C-207ENST00000527720 RAB10P61026 200 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 ASPHQ12797 758 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 TSNAXIP1Q2TAA8 658 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 CLLU1OSQ5K130 101 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 PIK3R6Q5UE93 754 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 KIAA0408Q6ZU52 694 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 C14orf80Q86SX3 495 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 TMEM151AQ8N4L1 468 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 ZNF781Q8N8C0 355 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 STYXQ8WUJ0 223 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 RANBP9Q96S59 729 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 GATA5Q9BWX5 397 aaPredicted RBP15.55■□□□□ 0.08
USH1C-207ENST00000527720 COG4Q9H9E3 785 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 PRDM5Q9NQX1 630 aaPredicted RBP15.55■□□□□ 0.08
USH1C-207ENST00000527720 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.55■□□□□ 0.08
USH1C-207ENST00000527720 ZNF212Q9UDV6 495 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 ACOT9Q9Y305 439 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 RAP2CQ9Y3L5 183 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 PCDHB5Q9Y5E4 795 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.55■□□□□ 0.08
USH1C-207ENST00000527720 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.55■□□□□ 0.08
USH1C-207ENST00000527720 SNUPNO95149 360 aaKnown RBP15.55■□□□□ 0.08
USH1C-207ENST00000527720 TBX4P57082 545 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 THOC5Q13769 683 aaKnown RBP15.55■□□□□ 0.08
USH1C-207ENST00000527720 ESRP1Q6NXG1 681 aaKnown RBP15.55■□□□□ 0.08
USH1C-207ENST00000527720 ZNF683Q8IZ20 524 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 ATP6V0D2Q8N8Y2 350 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 C2CD4AQ8NCU7 369 aaPredicted RBP15.55■□□□□ 0.08
USH1C-207ENST00000527720 THTPAQ9BU02 230 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 ZYG11BQ9C0D3 744 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 VPS45Q9NRW7 570 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 TMEM248Q9NWD8 314 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 MPP6Q9NZW5 540 aa15.55■□□□□ 0.08
USH1C-207ENST00000527720 FAM92AA1XBS5 289 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 TMEM88BA6NKF7 163 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 PMPCBO75439 489 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 KRT36O76013 467 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 COL6A1P12109 1028 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 STMN1P16949 149 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 ATP6V1C1P21283 382 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 ARNTP27540 789 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 KPNA2P52292 529 aaKnown RBP15.54■□□□□ 0.08
USH1C-207ENST00000527720 ACLYP53396 1101 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 ACTR3P61158 418 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 TNK2Q07912 1038 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 ZRSR2Q15696 482 aaKnown RBP15.54■□□□□ 0.08
USH1C-207ENST00000527720 KDELC1Q6UW63 502 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.54■□□□□ 0.08
USH1C-207ENST00000527720 TDRD5Q8NAT2 981 aaKnown RBP15.54■□□□□ 0.08
USH1C-207ENST00000527720 CALML6Q8TD86 181 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.54■□□□□ 0.08
USH1C-207ENST00000527720 NOL6Q9H6R4 1146 aaKnown RBP15.54■□□□□ 0.08
USH1C-207ENST00000527720 ATP13A1Q9HD20 1204 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 OLA1Q9NTK5 396 aaKnown RBP15.54■□□□□ 0.08
USH1C-207ENST00000527720 DNAJB4Q9UDY4 337 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 NUDT5Q9UKK9 219 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms