RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 PCDH20Q8N6Y1 951 aaKnown RBP10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 KDF1Q8NAX2 398 aaPredicted RBP10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 SAP25Q8TEE9 199 aa10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 HEPHQ9BQS7 1158 aa10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 CNPY3Q9BT09 278 aa10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 HDAC8Q9BY41 377 aa10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 TRIM7Q9C029 511 aa10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 TTYH3Q9C0H2 523 aa10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 MAGEH1Q9H213 219 aa10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 HAUS4Q9H6D7 363 aa10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 PREBQ9HCU5 417 aa10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 GPATCH2LQ9NWQ4 482 aa10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 AIPL1Q9NZN9 384 aa10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 MYO6Q9UM54 1294 aa10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 ZFR2Q9UPR6 939 aaKnown RBP10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 KNTC1P50748 2209 aa10.64□□□□□ -0.71
PRPF40B-204ENST00000527253 A0A1W2PQC6 194 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 GOLGA8CPA6NN73 597 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 SLC31A1O15431 190 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 KDELR3O43731 214 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 DFNA5O60443 496 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 TRIM16O95361 564 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 CAPNS1P04632 268 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 CCNHP51946 323 aaPredicted RBP10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 FGL2Q14314 439 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 ASIC2Q16515 512 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 CA9Q16790 459 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 SEL1L3Q68CR1 1132 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 PLEKHA7Q6IQ23 1121 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 KANSL1Q7Z3B3 1105 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 HORMAD1Q86X24 394 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 RTL3Q8N8U3 475 aaKnown RBP10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 MFSD2AQ8NA29 543 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 TMEM145Q8NBT3 493 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 OR6K2Q8NGY2 324 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 CCDC114Q96M63 670 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 PEBP4Q96S96 227 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 CDC6Q99741 560 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 MYOCQ99972 504 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 TM6SF2Q9BZW4 377 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 RETREG1Q9H6L5 497 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 CBX8Q9HC52 389 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 HECAQ9UBI9 543 aaPredicted RBP10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 ZMIZ1Q9ULJ6 1067 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 TPX2Q9ULW0 747 aaKnown RBP10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 DMTF1Q9Y222 760 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 FARP1Q9Y4F1 1045 aaPredicted RBP10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 CHD6Q8TD26 2715 aa10.63□□□□□ -0.71
PRPF40B-204ENST00000527253 TRPM6Q9BX84 2022 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 CXorf51AA0A1B0GTR3 108 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 SYCE3A1L190 88 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 TMEM191CA6NGB0 347 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 WASH4PA8MWX3 477 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 PRAMEF26H0Y7S4 382 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 SPINT1O43278 529 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 CREB3O43889 395 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 RAMP2O60895 175 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 FTLP02792 175 aaPredicted RBP10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 CCDC172P0C7W6 258 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 ITGB7P26010 798 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 EPHB2P29323 1055 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 PBX1P40424 430 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 PRKCIP41743 596 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 ABL2P42684 1182 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 GRK6P43250 576 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 RECQLP46063 649 aaPredicted RBP10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 RXRGP48443 463 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 CLDN2P57739 230 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 POLD3Q15054 466 aaPredicted RBP10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 MYLK3Q32MK0 819 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 FILIP1LQ4L180 1135 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 TMEM259Q4ZIN3 620 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 SETMARQ53H47 684 aaPredicted RBP10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 EFHC2Q5JST6 749 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 ATXN7L2Q5T6C5 722 aaPredicted RBP10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 SFMBT2Q5VUG0 894 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 NEK5Q6P3R8 708 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 DCUN1D2Q6PH85 259 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 CCNI2Q6ZMN8 369 aaPredicted RBP10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 CYP4V2Q6ZWL3 525 aaPredicted RBP10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 PARS2Q7L3T8 475 aaKnown RBP10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 TMC6Q7Z403 805 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 LUZP1Q86V48 1076 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 IQCHQ86VS3 1027 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 PLPP6Q8IY26 295 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 ISG20Q96AZ6 181 aaKnown RBP10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 HMCESQ96FZ2 354 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 VCPIP1Q96JH7 1222 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 ZDHHC6Q9H6R6 413 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 ERVMER34-1Q9H9K5 563 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 FZD3Q9NPG1 666 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 GDF3Q9NR23 364 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 GGT7Q9UJ14 662 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 APOBEC2Q9Y235 224 aaKnown RBP10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 FADS3Q9Y5Q0 445 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 PTPRBP23467 1997 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 PKD1L2Q7Z442 2459 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 SPEGQ15772 3267 aa10.62□□□□□ -0.71
PRPF40B-204ENST00000527253 APC2O95996 2303 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 RASA4BC9J798 803 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms