RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 TBCBQ99426 244 aa14.58□□□□□ -0.08
CPSF1-201ENST00000526271 MUC3BQ9H195 1237 aa14.58□□□□□ -0.08
CPSF1-201ENST00000526271 OSBPL2Q9H1P3 480 aa14.58□□□□□ -0.08
CPSF1-201ENST00000526271 NDFIP2Q9NV92 336 aa14.58□□□□□ -0.08
CPSF1-201ENST00000526271 NLGN3Q9NZ94 848 aa14.58□□□□□ -0.08
CPSF1-201ENST00000526271 SLC12A6Q9UHW9 1150 aa14.58□□□□□ -0.08
CPSF1-201ENST00000526271 NEU3Q9UQ49 428 aa14.58□□□□□ -0.08
CPSF1-201ENST00000526271 ITM2BQ9Y287 266 aa14.58□□□□□ -0.08
CPSF1-201ENST00000526271 PTPN13Q12923 2485 aa14.58□□□□□ -0.08
CPSF1-201ENST00000526271 SPTA1P02549 2419 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 SPTY2D1-AS1A0A0U1RR47 76 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 PAK4O96013 591 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-201ENST00000526271 RHOCP08134 193 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 NME1P15531 152 aaKnown RBP14.57□□□□□ -0.08
CPSF1-201ENST00000526271 ZNF18P17022 549 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 OXCT1P55809 520 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 CETN1Q12798 172 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 PAK1Q13153 545 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 STIM1Q13586 685 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 LY6DQ14210 128 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 ISXQ2M1V0 245 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 ARHGAP40Q5TG30 622 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 CRTC1Q6UUV9 634 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 KYAT3Q6YP21 454 aaKnown RBP14.57□□□□□ -0.08
CPSF1-201ENST00000526271 PARS2Q7L3T8 475 aaKnown RBP14.57□□□□□ -0.08
CPSF1-201ENST00000526271 RBFAQ8N0V3 343 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 SNRNP27Q8WVK2 155 aaKnown RBP14.57□□□□□ -0.08
CPSF1-201ENST00000526271 RNF34Q969K3 372 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 COL26A1Q96A83 441 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 PGAP3Q96FM1 320 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-201ENST00000526271 VCPIP1Q96JH7 1222 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 ZNF578Q96N58 590 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-201ENST00000526271 LGMNQ99538 433 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 APEX2Q9UBZ4 518 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 FCF1Q9Y324 198 aaKnown RBP14.57□□□□□ -0.08
CPSF1-201ENST00000526271 ENTPD2Q9Y5L3 495 aa14.57□□□□□ -0.08
CPSF1-201ENST00000526271 GCATO75600 419 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 PCDH8O95206 1070 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 CSF2P04141 144 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 GP1BAP07359 652 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 CELA2BP08218 269 aaPredicted RBP14.56□□□□□ -0.08
CPSF1-201ENST00000526271 ADRB3P13945 408 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 AKT2P31751 481 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 CDH5P33151 784 aaPredicted RBP14.56□□□□□ -0.08
CPSF1-201ENST00000526271 USP8P40818 1118 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 SERPINH1P50454 418 aaKnown RBP14.56□□□□□ -0.08
CPSF1-201ENST00000526271 PCBP4P57723 403 aaKnown RBP14.56□□□□□ -0.08
CPSF1-201ENST00000526271 PTAR1Q7Z6K3 402 aaPredicted RBP14.56□□□□□ -0.08
CPSF1-201ENST00000526271 SETD3Q86TU7 594 aaPredicted RBP14.56□□□□□ -0.08
CPSF1-201ENST00000526271 ZNF248Q8NDW4 579 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 IFI44Q8TCB0 444 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 FUBP1Q96AE4 644 aaKnown RBP14.56□□□□□ -0.08
CPSF1-201ENST00000526271 IFT43Q96FT9 208 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 ATXN7L3BQ96GX2 97 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 CCDC34Q96HJ3 373 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 SLC17A9Q9BYT1 436 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 POLR1BQ9H9Y6 1135 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 LMBRD1Q9NUN5 540 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 DNAJC28Q9NX36 388 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 IL36AQ9UHA7 158 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 SATB2Q9UPW6 733 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 HS3ST3A1Q9Y663 406 aa14.56□□□□□ -0.08
CPSF1-201ENST00000526271 BICDL2A1A5D9 508 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 A6NNZ2 444 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 ERVH48-1M5A8F1 160 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 EFSO43281 561 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 GNA14O95837 355 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 ITIH2P19823 946 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 ACVRL1P37023 503 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 GABRB2P47870 512 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 SULT1E1P49888 294 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 PFN3P60673 137 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 UBE2HP62256 183 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 CDKN3Q16667 212 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 MANEALQ5VSG8 457 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 KCTD16Q68DU8 428 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 IGF2-ASQ6U949 168 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 ENOSF1Q7L5Y1 443 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 ZNF605Q86T29 641 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 XYLT1Q86Y38 959 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 C2orf49Q9BVC5 232 aaPredicted RBP14.55□□□□□ -0.08
CPSF1-201ENST00000526271 C1QTNF2Q9BXJ5 285 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 TMEM59LQ9UK28 342 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 DNAJC12Q9UKB3 198 aa14.55□□□□□ -0.08
CPSF1-201ENST00000526271 UBR5O95071 2799 aaPredicted RBP14.55□□□□□ -0.08
CPSF1-201ENST00000526271 COL12A1Q99715 3063 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 GOLGA6L4A6NEF3 574 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 IGLON5A6NGN9 336 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 CDRT15L2A8MXV6 281 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 PRNPP04156 253 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 ITGB7P26010 798 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 L1CAMP32004 1257 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 PPP1R2P41236 205 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 CLCN6P51797 869 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 CCNHP51946 323 aaPredicted RBP14.54□□□□□ -0.08
CPSF1-201ENST00000526271 RNASE9P60153 205 aaKnown RBP14.54□□□□□ -0.08
CPSF1-201ENST00000526271 KRT83P78385 493 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 SRSF6Q13247 344 aaKnown RBP14.54□□□□□ -0.08
CPSF1-201ENST00000526271 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
CPSF1-201ENST00000526271 DEFB133Q30KQ1 61 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms