RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 SERPINB6P35237 376 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 DHPSP49366 369 aaPredicted RBP12.53□□□□□ -0.4
CTTN-210ENST00000525852 CCNHP51946 323 aaPredicted RBP12.53□□□□□ -0.4
CTTN-210ENST00000525852 GBE1Q04446 702 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 SLC10A2Q12908 348 aaPredicted RBP12.53□□□□□ -0.4
CTTN-210ENST00000525852 ELF2Q15723 593 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 TTC31Q49AM3 519 aaPredicted RBP12.53□□□□□ -0.4
CTTN-210ENST00000525852 SLC36A4Q6YBV0 504 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 LPCAT2Q7L5N7 544 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 DSG4Q86SJ6 1040 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 SLC41A1Q8IVJ1 513 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 KATNAL2Q8IYT4 538 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 TXLNBQ8N3L3 684 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 TMIEQ8NEW7 156 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 OR6K2Q8NGY2 324 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 KIAA1524Q8TCG1 905 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 GRIN3AQ8TCU5 1115 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 GANCQ8TET4 914 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 CASKIN2Q8WXE0 1202 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 CCDC114Q96M63 670 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 GPR174Q9BXC1 333 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 ARRDC1-AS1Q9H2J1 176 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 SMOC1Q9H4F8 434 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 SP110Q9HB58 689 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 FBXL12Q9NXK8 326 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 HECAQ9UBI9 543 aaPredicted RBP12.53□□□□□ -0.4
CTTN-210ENST00000525852 LHX3Q9UBR4 397 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 GMEB2Q9UKD1 530 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 SCML1Q9UN30 329 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
CTTN-210ENST00000525852 WASF2Q9Y6W5 498 aa12.53□□□□□ -0.4
CTTN-210ENST00000525852 KNL1Q8NG31 2342 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 ATXN2Q99700 1313 aaKnown RBP12.52□□□□□ -0.41
CTTN-210ENST00000525852 MAFKO60675 156 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 NDUFS2O75306 463 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 LEFTY1O75610 366 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 PALMO75781 387 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 RNASEH2AO75792 299 aaKnown RBP12.52□□□□□ -0.41
CTTN-210ENST00000525852 RHOBTB1O94844 696 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 EPN2O95208 641 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 PEX11BO96011 259 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 GSRP00390 522 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 RETP07949 1114 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 CTNNA1P35221 906 aaKnown RBP12.52□□□□□ -0.41
CTTN-210ENST00000525852 DRD3P35462 400 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 CDKN2BP42772 138 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 RECQLP46063 649 aaPredicted RBP12.52□□□□□ -0.41
CTTN-210ENST00000525852 CREB5Q02930 508 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 IL10RBQ08334 325 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 SPEM2Q0P670 501 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 GALNT2Q10471 571 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 CNTN1Q12860 1018 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 LLGL1Q15334 1064 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 TAZQ16635 292 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 ARSIQ5FYB1 569 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 SLC9A4Q6AI14 798 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 USP30Q70CQ3 517 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 VSIG1Q86XK7 387 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 PLPP6Q8IY26 295 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 RYBPQ8N488 228 aaPredicted RBP12.52□□□□□ -0.41
CTTN-210ENST00000525852 HDDC3Q8N4P3 179 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 ATPAF2Q8N5M1 289 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 PLD5Q8N7P1 536 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 OR2AP1Q8NGE2 309 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 LRRN4Q8WUT4 740 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 PDLIM2Q96JY6 352 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 EXOC2Q96KP1 924 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 OMDQ99983 421 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 HEPHQ9BQS7 1158 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 NEUROG2Q9H2A3 272 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 ZDHHC6Q9H6R6 413 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 IL36AQ9UHA7 158 aa12.52□□□□□ -0.41
CTTN-210ENST00000525852 SPTBN4Q9H254 2564 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 C1QTNF3-AMACRE9PGA6 284 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 KPNA3O00505 521 aaPredicted RBP12.51□□□□□ -0.41
CTTN-210ENST00000525852 FTCDO95954 541 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 PRNPP04156 253 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 KRT10P13645 584 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 ITPKAP23677 461 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 RGRP47804 291 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 RHOAP61586 193 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 SNRPD1P62314 119 aaKnown RBP12.51□□□□□ -0.41
CTTN-210ENST00000525852 SLC10A7Q0GE19 358 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 GSE1Q14687 1217 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 MYLK3Q32MK0 819 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 ODF2Q5BJF6 829 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 FAM46CQ5VWP2 391 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 SPOCD1Q6ZMY3 1216 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 NT5DC3Q86UY8 548 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 TSEN2Q8NCE0 465 aaKnown RBP12.51□□□□□ -0.41
CTTN-210ENST00000525852 ARRDC3Q96B67 414 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 LOXL4Q96JB6 756 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 HSPA12BQ96MM6 686 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 BTBD1Q9H0C5 482 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 KCNF1Q9H3M0 494 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 C6orf106Q9H6K1 298 aaPredicted RBP12.51□□□□□ -0.41
CTTN-210ENST00000525852 TMEM74BQ9NUR3 256 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 DTLQ9NZJ0 730 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 GUCA1BQ9UMX6 200 aa12.51□□□□□ -0.41
CTTN-210ENST00000525852 NCKAP1Q9Y2A7 1128 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms