RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 EFCAB12Q6NXP0 572 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 UNC93AQ86WB7 457 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 FAM131BQ86XD5 332 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 LSMEM2Q8N112 164 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 PELI3Q8N2H9 469 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 FAM47BQ8NA70 645 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 KDM1BQ8NB78 822 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 ZNF420Q8TAQ5 688 aaPredicted RBP10.4□□□□□ -0.74
SPIDR-225ENST00000524141 ADAMTS16Q8TE57 1224 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 LPGAT1Q92604 370 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 MFSD3Q96ES6 412 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 HIPK3Q9H422 1215 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 LIN28AQ9H9Z2 209 aaKnown RBP10.4□□□□□ -0.74
SPIDR-225ENST00000524141 CACNA2D2Q9NY47 1150 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 PCDHGA4Q9Y5G9 962 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.4□□□□□ -0.74
SPIDR-225ENST00000524141 COL4A5P29400 1685 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 TARM1B6A8C7 271 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 E7ENX8 843 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 SDHDO14521 159 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 NCAM2O15394 837 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 MTSS1O43312 755 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 CAPN15O75808 1086 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 JUNP05412 331 aaKnown RBP10.4□□□□□ -0.74
SPIDR-225ENST00000524141 GJB1P08034 283 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 SBK3P0C264 359 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 PORP16435 677 aaPredicted RBP10.4□□□□□ -0.74
SPIDR-225ENST00000524141 FGFR3P22607 806 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 MATKP42679 507 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 ABCG1P45844 678 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 CCR10P46092 362 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 ENTPD1P49961 510 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 ITGA7Q13683 1181 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 GRM3Q14832 879 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 SLC25A52Q3SY17 297 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 NHSL2Q5HYW2 709 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 GK5Q6ZS86 529 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 CHSY3Q70JA7 882 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 ZC3HC1Q86WB0 502 aaKnown RBP10.4□□□□□ -0.74
SPIDR-225ENST00000524141 CLVS1Q8IUQ0 354 aaPredicted RBP10.4□□□□□ -0.74
SPIDR-225ENST00000524141 FSTL5Q8N475 847 aaPredicted RBP10.4□□□□□ -0.74
SPIDR-225ENST00000524141 CLEC4CQ8WTT0 213 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 TFAP2CQ92754 450 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 BORCS5Q969J3 196 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 GPR20Q99678 358 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 FTHL17Q9BXU8 183 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 PCDHAC1Q9H158 963 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 IARS2Q9NSE4 1012 aaKnown RBP10.4□□□□□ -0.74
SPIDR-225ENST00000524141 SETD4Q9NVD3 440 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 RUVBL2Q9Y230 463 aaKnown RBP10.4□□□□□ -0.74
SPIDR-225ENST00000524141 HES2Q9Y543 173 aa10.4□□□□□ -0.74
SPIDR-225ENST00000524141 TANC1Q9C0D5 1861 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 CROCCQ5TZA2 2017 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 EVPLQ92817 2033 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 ZSWIM8A7E2V4 1837 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 IQCF3P0C7M6 154 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 SLC35E2BP0CK96 405 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 IDO1P14902 403 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 STT3AP46977 705 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 RPL34P49207 117 aaKnown RBP10.39□□□□□ -0.75
SPIDR-225ENST00000524141 CLCN3P51790 818 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 ZBTB17Q13105 803 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 LRP8Q14114 963 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 PSMD5Q16401 504 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 REP15Q6BDI9 236 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 FAM45BPQ6NSW5 357 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 HACD2Q6Y1H2 254 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 LZTR1Q8N653 840 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 PCDH20Q8N6Y1 951 aaKnown RBP10.39□□□□□ -0.75
SPIDR-225ENST00000524141 MFSD2AQ8NA29 543 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 FAM45AQ8TCE6 357 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 SLCO4A1Q96BD0 722 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 TCF12Q99081 682 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 SLC29A1Q99808 456 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 MRPL45Q9BRJ2 306 aaKnown RBP10.39□□□□□ -0.75
SPIDR-225ENST00000524141 NOL11Q9H8H0 719 aaKnown RBP10.39□□□□□ -0.75
SPIDR-225ENST00000524141 MRM3Q9HC36 420 aaKnown RBP10.39□□□□□ -0.75
SPIDR-225ENST00000524141 TRPC7Q9HCX4 862 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 ARMC1Q9NVT9 282 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 ARHGEF38Q9NXL2 777 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 XPR1Q9UBH6 696 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 CNOT6Q9ULM6 557 aaKnown RBP10.39□□□□□ -0.75
SPIDR-225ENST00000524141 ACOT9Q9Y305 439 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 HBP1O60381 514 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 DLX3O60479 287 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 USP12O75317 370 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 LCP1P13796 627 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 ZNF12P17014 697 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 PTPN3P26045 913 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 GLRBP48167 497 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 SULT1E1P49888 294 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 FASTKQ14296 549 aaKnown RBP10.39□□□□□ -0.75
SPIDR-225ENST00000524141 MAP7D1Q3KQU3 841 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 INTS11Q5TA45 600 aaKnown RBP10.39□□□□□ -0.75
SPIDR-225ENST00000524141 KCTD11Q693B1 232 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 ITPRIPL1Q6GPH6 555 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 TTC33Q6PID6 262 aaPredicted RBP10.39□□□□□ -0.75
SPIDR-225ENST00000524141 KRT27Q7Z3Y8 459 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 DHFR2Q86XF0 187 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 CAMK1DQ8IU85 385 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms