RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 RPS21P63220 83 aaKnown RBP12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 ARF5P84085 180 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 TARDBPQ13148 414 aaKnown RBP eCLIP12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 POM121L1PQ3SYA9 428 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 HSP90AA4PQ58FG1 418 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 PDZD3Q86UT5 571 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 FAM181AQ8N9Y4 354 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 OR4C6Q8NH72 309 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 RXFP2Q8WXD0 754 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 NTAN1Q96AB6 310 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 RAB7BQ96AH8 199 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 BMFQ96LC9 184 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 TNKS2Q9H2K2 1166 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 USP29Q9HBJ7 922 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 ATP13A1Q9HD20 1204 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 TMEM248Q9NWD8 314 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 SIK3Q9Y2K2 1263 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 TMEM131Q92545 1883 aa12.89□□□□□ -0.35
TOP1MT-217ENST00000523417 SIGLEC16A6NMB1 481 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 PES1O00541 588 aaKnown RBP12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 TSPAN6O43657 245 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 SIGLEC6O43699 453 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 PIAS2O75928 621 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 GFPT2O94808 682 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 PCDH8O95206 1070 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 POP4O95707 220 aaKnown RBP12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 GSRP00390 522 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 CKMT1AP12532 417 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 ADRB3P13945 408 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 SDC4P31431 198 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 STAT1P42224 750 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 POLR2FP61218 127 aaKnown RBP12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 ATP11AP98196 1134 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 KRT31Q15323 416 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 COL28A1Q2UY09 1125 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 C19orf48Q6RUI8 117 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 GCNT7Q6ZNI0 430 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 PHF13Q86YI8 300 aaPredicted RBP12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 EMC1Q8N766 993 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 DCBLD1Q8N8Z6 715 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 SLC20A1Q8WUM9 679 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 ARHGEF2Q92974 986 aaKnown RBP12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 NXPE2Q96DL1 559 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 TAB2Q9NYJ8 693 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 NEU3Q9UQ49 428 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 CA5BQ9Y2D0 317 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 CSNK1G3Q9Y6M4 447 aa12.88□□□□□ -0.35
TOP1MT-217ENST00000523417 SPTY2D1-AS1A0A0U1RR47 76 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 TCRBV5S1A1TA0A578 114 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 NEMP2A6NFY4 417 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 ZSCAN5CA6NGD5 496 aaPredicted RBP12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 SCAMP1O15126 338 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 KDELR3O43731 214 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 LRIG2O94898 1065 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 GP1BAP07359 652 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 PLEKP08567 350 aaPredicted RBP12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 KRT3P12035 628 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 HOXB3P14651 431 aaPredicted RBP12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 PRLRP16471 622 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 CCNHP51946 323 aaPredicted RBP12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 HDAC4P56524 1084 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 INSM1Q01101 510 aaPredicted RBP12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 FGL2Q14314 439 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 MYLK3Q32MK0 819 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 SOWAHCQ53LP3 525 aaPredicted RBP12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 RAB6CQ53S08 254 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 INO80DQ53TQ3 878 aaPredicted RBP12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 CCDC157Q569K6 752 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 ZNF805Q5CZA5 627 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 FKBP15Q5T1M5 1219 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 HES3Q5TGS1 186 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 SEL1L3Q68CR1 1132 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 Q6ZSR6 202 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 SLC22A18ASQ8N1D0 253 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 OR13H1Q8NG92 308 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 SLC30A5Q8TAD4 765 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 HNRNPLLQ8WVV9 542 aaKnown RBP12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 CASKIN2Q8WXE0 1202 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 PCDHB18PQ96TA0 734 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 KLF6Q99612 283 aaPredicted RBP12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 RAB6CQ9H0N0 254 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 VPS16Q9H269 839 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 METTL5Q9NRN9 209 aaKnown RBP12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 NDFIP2Q9NV92 336 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 FANCLQ9NW38 375 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 NLGN3Q9NZ94 848 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 HECAQ9UBI9 543 aaPredicted RBP12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 LIMA1Q9UHB6 759 aaKnown RBP12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 HPCAL4Q9UM19 191 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 MFHAS1Q9Y4C4 1052 aa12.87□□□□□ -0.35
TOP1MT-217ENST00000523417 ADAMTS20P59510 1910 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 C16orf96A6NNT2 1141 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 A6NNZ2 444 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 WASH4PA8MWX3 477 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 FAM72CH0Y354 149 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 TOR1BO14657 336 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 AREL1O15033 823 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 EPHB6O15197 1021 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 LZTS3O60299 673 aaPredicted RBP12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 PAK4O96013 591 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms