RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 CCDC187A0A096LP49 1063 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 SPTY2D1-AS1A0A0U1RR47 76 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 POM121BA6NF01 834 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 K7ERQ8 282 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 TPP1O14773 563 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 GNA14O95837 355 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 GIMD1P0DJR0 217 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 ADRB3P13945 408 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 KRT9P35527 623 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 RNASE9P60153 205 aaKnown RBP11.74□□□□□ -0.53
MRPS28-206ENST00000520946 FZD2Q14332 565 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 MEA1Q16626 185 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 ARHGAP44Q17R89 818 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 FAXCQ5TGI0 409 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 C22orf39Q6P5X5 142 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 IGF2-ASQ6U949 168 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 DPY19L3Q6ZPD9 716 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 ENOSF1Q7L5Y1 443 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 TFAP2DQ7Z6R9 452 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 ZSCAN30Q86W11 494 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 PASD1Q8IV76 773 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 DCAF4L2Q8NA75 395 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 CHST14Q8NCH0 376 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 OR52K2Q8NGK3 314 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 BMFQ96LC9 184 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 HEPHQ9BQS7 1158 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 STRADBQ9C0K7 418 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 TKTL2Q9H0I9 626 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 GDPD2Q9HCC8 539 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 GULP1Q9UBP9 304 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 APOBEC3BQ9UH17 382 aaKnown RBP11.74□□□□□ -0.53
MRPS28-206ENST00000520946 STAP1Q9ULZ2 295 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 ZFR2Q9UPR6 939 aaKnown RBP11.74□□□□□ -0.53
MRPS28-206ENST00000520946 ENTPD2Q9Y5L3 495 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 BPTFQ12830 3046 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 EME2A4GXA9 379 aaPredicted RBP11.73□□□□□ -0.53
MRPS28-206ENST00000520946 COL6A6A6NMZ7 2263 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 TMX2-CTNND1H3BSU7 103 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 SMAD6O43541 496 aaKnown RBP11.73□□□□□ -0.53
MRPS28-206ENST00000520946 SRGAP2O75044 1071 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 FGFR1OPO95684 399 aaKnown RBP11.73□□□□□ -0.53
MRPS28-206ENST00000520946 F9P00740 461 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 KRT10P13645 584 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 ITGB7P26010 798 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 L1CAMP32004 1257 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 NOS2P35228 1153 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 MLLT3P42568 568 aaPredicted RBP11.73□□□□□ -0.53
MRPS28-206ENST00000520946 CSRP3P50461 194 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 IRAK1P51617 712 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 ADKP55263 362 aaKnown RBP11.73□□□□□ -0.53
MRPS28-206ENST00000520946 PTK2Q05397 1052 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 SLC20A2Q08357 652 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 PRRT3Q5FWE3 981 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 C14orf80Q86SX3 495 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 FBXO39Q8N4B4 442 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 ZSCAN1Q8NBB4 408 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 LMO3Q8TAP4 145 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 SNRNP27Q8WVK2 155 aaKnown RBP11.73□□□□□ -0.53
MRPS28-206ENST00000520946 NELFBQ8WX92 580 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 KREMEN1Q96MU8 473 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 SLC2A13Q96QE2 648 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 C1QTNF7Q9BXJ2 289 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 ZDHHC6Q9H6R6 413 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 EPB41L5Q9HCM4 733 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 ATP13A1Q9HD20 1204 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 RRN3Q9NYV6 651 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 SEPT10Q9P0V9 454 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 NYNRINQ9P2P1 1898 aaKnown RBP11.73□□□□□ -0.53
MRPS28-206ENST00000520946 OR51B4Q9Y5P0 310 aa11.73□□□□□ -0.53
MRPS28-206ENST00000520946 A0A0D9SEW6 157 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 LY6G6EA0A0G2JKS1 128 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 IGLON5A6NGN9 336 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 TSPAN6O43657 245 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 DAB1O75553 588 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 CNTN5O94779 1100 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 ITGA2BP08514 1039 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 SFTPCP11686 197 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 CTSEP14091 401 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 SULT1E1P49888 294 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 INHBCP55103 352 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 SLC6A3Q01959 620 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 DEUP1Q05D60 604 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 C1orf61Q13536 156 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 TMEM259Q4ZIN3 620 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 ALFQ53S48 1182 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 CARD16Q5EG05 197 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 BRMS1LQ5PSV4 323 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 ACBD5Q5T8D3 534 aaPredicted RBP11.72□□□□□ -0.53
MRPS28-206ENST00000520946 FAM183BPQ6ZVS7 135 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 PCDH20Q8N6Y1 951 aaKnown RBP11.72□□□□□ -0.53
MRPS28-206ENST00000520946 RAB7BQ96AH8 199 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 ARHGEF26Q96DR7 871 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 CPXM1Q96SM3 734 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 PSMB7Q99436 277 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 CCDC3Q9BQI4 270 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 CEP44Q9C0F1 390 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 CAAP1Q9H8G2 361 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 TMEM51Q9NW97 253 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.72□□□□□ -0.53
MRPS28-206ENST00000520946 MPP6Q9NZW5 540 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms