RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 PAK5Q9P286 719 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 KLHL8Q9P2G9 620 aaPredicted RBP12.74□□□□□ -0.37
PDPN-210ENST00000513143 SLCO3A1Q9UIG8 710 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 HCN2Q9UL51 889 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 PLA2G4CQ9UP65 541 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 FCF1Q9Y324 198 aaKnown RBP12.74□□□□□ -0.37
PDPN-210ENST00000513143 ANKRD36A6QL64 1941 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 KRBA1A5PL33 1030 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 EFCAB8A8MWE9 144 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 ZNF821O75541 412 aaPredicted RBP12.73□□□□□ -0.37
PDPN-210ENST00000513143 NEBLO76041 1014 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 EGFP01133 1207 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 HLA-DQB2P05538 268 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 CHRM1P11229 460 aaPredicted RBP12.73□□□□□ -0.37
PDPN-210ENST00000513143 HNRNPLP14866 589 aaKnown RBP eCLIP12.73□□□□□ -0.37
PDPN-210ENST00000513143 ACTN2P35609 894 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 KIR2DL1P43626 348 aaPredicted RBP12.73□□□□□ -0.37
PDPN-210ENST00000513143 ST8SIA6P61647 398 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 TUBB4BP68371 445 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 MRPS25P82663 173 aaKnown RBP12.73□□□□□ -0.37
PDPN-210ENST00000513143 NSUN2Q08J23 767 aaKnown RBP eCLIP12.73□□□□□ -0.37
PDPN-210ENST00000513143 ZNF234Q14588 700 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 TRIP13Q15645 432 aaPredicted RBP12.73□□□□□ -0.37
PDPN-210ENST00000513143 DLG2Q15700 870 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 KCTD19Q17RG1 926 aaPredicted RBP12.73□□□□□ -0.37
PDPN-210ENST00000513143 DGKKQ5KSL6 1271 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 ALG1LQ6GMV1 187 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 ZNF852Q6ZMS4 543 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.73□□□□□ -0.37
PDPN-210ENST00000513143 TSEN2Q8NCE0 465 aaKnown RBP12.73□□□□□ -0.37
PDPN-210ENST00000513143 CCHCR1Q8TD31 782 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 KCNV2Q8TDN2 545 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 FRS2Q8WU20 508 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 GLOD4Q9HC38 313 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 NT5MQ9NPB1 228 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 ARHGEF3Q9NR81 526 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 HAUS2Q9NVX0 235 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 THAP10Q9P2Z0 257 aaPredicted RBP12.73□□□□□ -0.37
PDPN-210ENST00000513143 LHX3Q9UBR4 397 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 MUTYHQ9UIF7 546 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 CA14Q9ULX7 337 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 TRIOO75962 3097 aa12.73□□□□□ -0.37
PDPN-210ENST00000513143 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.72□□□□□ -0.37
PDPN-210ENST00000513143 ANTXRLA6NF34 631 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 NPC1O15118 1278 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 MUSKO15146 869 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 METTL18O95568 372 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 NFKB1P19838 968 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 CR2P20023 1033 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 IVDP26440 423 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 RGRP47804 291 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 STARD6P59095 220 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 MAXP61244 160 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 RHOAP61586 193 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 ENPP2Q13822 863 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 CCINQ13939 588 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 PARP6Q2NL67 630 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 EMC10Q5UCC4 262 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 EGFLAMQ63HQ2 1017 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 ITPRIPL1Q6GPH6 555 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 C22orf39Q6P5X5 142 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 ARHGEF18Q6ZSZ5 1173 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 PLPP6Q8IY26 295 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 ZNF687Q8N1G0 1237 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 PCDH20Q8N6Y1 951 aaKnown RBP12.72□□□□□ -0.37
PDPN-210ENST00000513143 SHDQ96IW2 340 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 NECAB3Q96P71 396 aaPredicted RBP12.72□□□□□ -0.37
PDPN-210ENST00000513143 ERP44Q9BS26 406 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 TRIM51Q9BSJ1 452 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 POLR1EQ9GZS1 481 aaKnown RBP12.72□□□□□ -0.37
PDPN-210ENST00000513143 GBA3Q9H227 469 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 TMEM245Q9H330 911 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 RSPH14Q9UHP6 348 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 FBXL21Q9UKT6 434 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 SLC8A2Q9UPR5 921 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 CKAP5Q14008 2032 aa12.72□□□□□ -0.37
PDPN-210ENST00000513143 TTC34A8MYJ7 566 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 BHMG1C9JSJ3 638 aaPredicted RBP12.71□□□□□ -0.37
PDPN-210ENST00000513143 GSRP00390 522 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 CD72P21854 359 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 CES1P23141 567 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 FDFT1P37268 417 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 CSNK1DP48730 415 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 SLC7A5Q01650 507 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 ITKQ08881 620 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 NIPAL4Q0D2K0 466 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 GPS1Q13098 491 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 ACCSLQ4AC99 568 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 FBXO43Q4G163 708 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 FNDC3BQ53EP0 1204 aaKnown RBP12.71□□□□□ -0.37
PDPN-210ENST00000513143 RALGPS1Q5JS13 557 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 DUPD1Q68J44 220 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 CCDC70Q6NSX1 233 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 KLHDC8BQ8IXV7 354 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 ZNF513Q8N8E2 541 aaPredicted RBP12.71□□□□□ -0.37
PDPN-210ENST00000513143 ARRDC2Q8TBH0 407 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 IMP4Q96G21 291 aaKnown RBP12.71□□□□□ -0.37
PDPN-210ENST00000513143 FCRL5Q96RD9 977 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 NUDCD1Q96RS6 583 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 RAB17Q9H0T7 212 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms