RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 SLC27A1Q6PCB7 646 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 IYDQ6PHW0 289 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 MAMDC4Q6UXC1 1216 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 PRRT2Q7Z6L0 340 aaPredicted RBP11.73□□□□□ -0.53
SNX25-205ENST00000512853 FSTL5Q8N475 847 aaPredicted RBP11.73□□□□□ -0.53
SNX25-205ENST00000512853 NPWQ8N729 165 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 DPF3Q92784 378 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 MOCOSQ96EN8 888 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 MAML3Q96JK9 1138 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 PPP1R36Q96LQ0 422 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 GPR78Q96P69 363 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 HAUS8Q9BT25 410 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 DUSP16Q9BY84 665 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 MRPL1Q9BYD6 325 aaKnown RBP11.73□□□□□ -0.53
SNX25-205ENST00000512853 CHRAC1Q9NRG0 131 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 MRGBPQ9NV56 204 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 RNF11Q9Y3C5 154 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 PCDHGA7Q9Y5G6 932 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 CEPT1Q9Y6K0 416 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 MYLKQ15746 1914 aa11.73□□□□□ -0.53
SNX25-205ENST00000512853 SHROOM3Q8TF72 1996 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 MYOCOSA0A1B0GUC4 107 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 FAM72CH0Y354 149 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 PSMD3O43242 534 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 PGK1P00558 417 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 CD4P01730 458 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 ZNF23P17027 643 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 PSMC3P17980 439 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 WARSP23381 471 aaKnown RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 SLC5A2P31639 672 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 MSX2P35548 267 aaPredicted RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 GJA9P57773 515 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 DNAJB13P59910 316 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 TPI1P60174 286 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 CDH17Q12864 832 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 UGP2Q16851 508 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 FAM72AQ5TYM5 149 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 FAM72DQ6L9T8 149 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 CHSY3Q70JA7 882 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 AMIGO2Q86SJ2 522 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 OSTM1Q86WC4 334 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 CARM1Q86X55 608 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 FAM72BQ86X60 149 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 GALNT4Q8N4A0 578 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 RNF169Q8NCN4 708 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 PPTC7Q8NI37 304 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 DNAJC1Q96KC8 554 aaKnown RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 TNIP3Q96KP6 325 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 MARK4Q96L34 752 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 NPAS2Q99743 824 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 EIF2AQ9BY44 585 aaKnown RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 MRM3Q9HC36 420 aaKnown RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 PREBQ9HCU5 417 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 WDR6Q9NNW5 1121 aaKnown RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 TXNRD2Q9NNW7 524 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 ACSS2Q9NR19 701 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 EPS15L1Q9UBC2 864 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 XPR1Q9UBH6 696 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 RUVBL2Q9Y230 463 aaKnown RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 COL4A4P53420 1690 aaPredicted RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 SYNJ2BP-COX16A0A087WUM0 186 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 CCDC160A6NGH7 325 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 ASB14A6NK59 587 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 TRIM24O15164 1050 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 CACNG3O60359 315 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 RECQL4O94761 1208 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 CDK4P11802 303 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 NPR3P17342 541 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 PTPN1P18031 435 aaKnown RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 CDH2P19022 906 aaPredicted RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 GABRB3P28472 473 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 PNPLA4P41247 253 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 TRAP1Q12931 704 aaKnown RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 NME3Q13232 169 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 MYBPC3Q14896 1274 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 MAPRE2Q15555 327 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 GLRA4Q5JXX5 417 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 IL23RQ5VWK5 629 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 SYPL2Q5VXT5 272 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 NAPEPLDQ6IQ20 393 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 ISLR2Q6UXK2 745 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 GK5Q6ZS86 529 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 PIWIL4Q7Z3Z4 852 aaKnown RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 SLC41A1Q8IVJ1 513 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 RNF148Q8N7C7 305 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 CEP70Q8NHQ1 597 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 ATP6V1E2Q96A05 226 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 EMID1Q96A84 441 aaPredicted RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 TMA16Q96EY4 203 aaKnown RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 FAR2Q96K12 515 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 TEKT5Q96M29 485 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 FAM210AQ96ND0 272 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 APOL2Q9BQE5 337 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 OSBPL11Q9BXB4 747 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 UNC93B1Q9H1C4 597 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 ADAMTS10Q9H324 1103 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 COX16Q9P0S2 106 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.72□□□□□ -0.53
SNX25-205ENST00000512853 RBPJLQ9UBG7 517 aa11.72□□□□□ -0.53
SNX25-205ENST00000512853 NRCAMQ92823 1304 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms