RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 PSTKQ8IV42 348 aaKnown RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 ALG2Q9H553 416 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 ERVK-18Q9QC07 812 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 STOML2Q9UJZ1 356 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 DUOX2Q9NRD8 1548 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 RIC1Q4ADV7 1423 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 CIB4A0PJX0 185 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 DPPA5A6NC42 116 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 TRIM24O15164 1050 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 CYP1A2P05177 515 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 BMP4P12644 408 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 SERPINB1P30740 379 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 PTPN12Q05209 780 aaKnown RBP9.03□□□□□ -0.96
VCAN-208ENST00000512590 RASGEF1BQ0VAM2 473 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 SMTNL2Q2TAL5 461 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 TTMPQ5BVD1 217 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 FBXO47Q5MNV8 452 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 ACSM2BQ68CK6 577 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 PGBD2Q6P3X8 592 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 AAGABQ6PD74 315 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 SNX21Q969T3 373 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 FDXACB1Q9BRP7 624 aaPredicted RBP9.03□□□□□ -0.96
VCAN-208ENST00000512590 SPATC1LQ9H0A9 340 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 C10orf88Q9H8K7 445 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 PRMT8Q9NR22 394 aaPredicted RBP9.03□□□□□ -0.96
VCAN-208ENST00000512590 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.03□□□□□ -0.96
VCAN-208ENST00000512590 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.03□□□□□ -0.96
VCAN-208ENST00000512590 MAN1B1Q9UKM7 699 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 NPC1L1Q9UHC9 1359 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 TTLL8A6PVC2 850 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 MED24O75448 989 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 BCL10O95999 233 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 CMPK1P30085 196 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 TRAF2Q12933 501 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 ZNF792Q3KQV3 632 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 RTL4Q6ZR62 310 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 MFSD3Q96ES6 412 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 BORCS8Q96FH0 119 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 TGS1Q96RS0 853 aaKnown RBP9.03□□□□□ -0.96
VCAN-208ENST00000512590 CCT8L2Q96SF2 557 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 MLXIPLQ9NP71 852 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 RBM22Q9NW64 420 aaKnown RBP eCLIP9.03□□□□□ -0.96
VCAN-208ENST00000512590 IFNA6P05013 189 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 VDRP11473 427 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 RLBP1P12271 317 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 CD40LGP29965 261 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 MAT2AP31153 395 aaKnown RBP9.03□□□□□ -0.96
VCAN-208ENST00000512590 CRATP43155 626 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 ST3GAL4Q11206 333 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 DDR2Q16832 855 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 LNX2Q8N448 690 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 C12orf66Q96MD2 445 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 TARS2Q9BW92 718 aaKnown RBP9.03□□□□□ -0.96
VCAN-208ENST00000512590 CYP4F12Q9HCS2 524 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 ENAMQ9NRM1 1142 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 MTMR4Q9NYA4 1195 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 TMEM150CB9EJG8 249 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 ZBTB39O15060 712 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 SERPINA3P01011 423 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 IFNGP01579 166 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 PRMT2P55345 433 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 ITGA1P56199 1179 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 MC1RQ01726 317 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 SF3B4Q15427 424 aaKnown RBP eCLIP9.03□□□□□ -0.96
VCAN-208ENST00000512590 RBMS3Q6XE24 437 aaKnown RBP9.03□□□□□ -0.96
VCAN-208ENST00000512590 SNX32Q86XE0 403 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 TMEM126BQ8IUX1 230 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 OR4K17Q8NGC6 315 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 TMEM117Q9H0C3 514 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 HIPK2Q9H2X6 1198 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 ANTXR1Q9H6X2 564 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 PNO1Q9NRX1 252 aaKnown RBP9.03□□□□□ -0.96
VCAN-208ENST00000512590 GNPTGQ9UJJ9 305 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 AP4E1Q9UPM8 1137 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 A0A0X1KG70 313 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 ZNF23P17027 643 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 CCNOP22674 350 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 TIGD5Q53EQ6 642 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 TMPPEQ6ZT21 453 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 CHERPQ8IWX8 916 aaKnown RBP9.03□□□□□ -0.96
VCAN-208ENST00000512590 TMEM132CQ8N3T6 1108 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 DENND1AQ8TEH3 1009 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 PNPLA2Q96AD5 504 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 DCUN1D5Q9BTE7 237 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 GPAMQ9HCL2 828 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 MARCH2Q9P0N8 246 aa9.03□□□□□ -0.96
VCAN-208ENST00000512590 MAGED1Q9Y5V3 778 aaPredicted RBP9.03□□□□□ -0.96
VCAN-208ENST00000512590 PCF11O94913 1555 aaKnown RBP9.02□□□□□ -0.96
VCAN-208ENST00000512590 MUSKO15146 869 aa9.02□□□□□ -0.97
VCAN-208ENST00000512590 MAFKO60675 156 aa9.02□□□□□ -0.97
VCAN-208ENST00000512590 SLC25A14O95258 325 aaPredicted RBP9.02□□□□□ -0.97
VCAN-208ENST00000512590 POLD2P49005 469 aa9.02□□□□□ -0.97
VCAN-208ENST00000512590 ERVK-24P63145 666 aa9.02□□□□□ -0.97
VCAN-208ENST00000512590 CCDC137Q6PK04 289 aaKnown RBP9.02□□□□□ -0.97
VCAN-208ENST00000512590 GKN2Q86XP6 184 aa9.02□□□□□ -0.97
VCAN-208ENST00000512590 SLC22A8Q8TCC7 542 aa9.02□□□□□ -0.97
VCAN-208ENST00000512590 KLHL6Q8WZ60 621 aa9.02□□□□□ -0.97
VCAN-208ENST00000512590 NINJ1Q92982 152 aa9.02□□□□□ -0.97
VCAN-208ENST00000512590 PTERQ96BW5 349 aa9.02□□□□□ -0.97
VCAN-208ENST00000512590 CNGB3Q9NQW8 809 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms