RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 BTKQ06187 659 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 GALNTL6Q49A17 601 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 ARCQ7LC44 396 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 OTOP2Q7RTS6 562 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 SLC41A1Q8IVJ1 513 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 TBC1D19Q8N5T2 526 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 RNF217Q8TC41 542 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 NTAN1Q96AB6 310 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 SAR1AQ9NR31 198 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 SNX15Q9NRS6 342 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 PCDHB9Q9Y5E1 797 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 SNX10Q9Y5X0 201 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 ARHGAP10A1A4S6 786 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 NRP1O14786 923 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 DCXO43602 365 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 ABL2P42684 1182 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 PARP15Q460N3 678 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 PKN3Q6P5Z2 889 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 CMC1Q7Z7K0 106 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 KCTD13Q8WZ19 329 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 MYCBPQ99417 103 aaPredicted RBP13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 AGO3Q9H9G7 860 aaKnown RBP13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 KAT6AQ92794 2004 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 C4AP0C0L4 1744 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 MYH8P13535 1937 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 ZNF132P52740 706 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 PHEXP78562 749 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 TLE2Q04725 743 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 MED21Q13503 144 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 RCN1Q15293 331 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 CACHD1Q5VU97 1274 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 ERAP2Q6P179 960 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 YTHDF3Q7Z739 585 aaKnown RBP13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 OSTM1Q86WC4 334 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 DNAJC9Q8WXX5 260 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 MYLK2Q9H1R3 596 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 RHOJQ9H4E5 214 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 MID1IP1Q9NPA3 183 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 CHRAC1Q9NRG0 131 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 PIGVQ9NUD9 493 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 EIF4E1BA6NMX2 242 aaKnown RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 EVPLLA8MZ36 301 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 RAD51BO15315 384 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 GUCA1CO95843 209 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 C2P06681 752 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 SLC10A3P09131 477 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 LPOP22079 712 aaPredicted RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 CES1P23141 567 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 MZF1P28698 734 aaPredicted RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 LRPAP1P30533 357 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 NME5P56597 212 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 RAB10P61026 200 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 CLDN10P78369 228 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 MSLNQ13421 630 aaPredicted RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 HIST2H2ACQ16777 129 aaPredicted RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 PTPRNQ16849 979 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 TMEM259Q4ZIN3 620 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 HIST2H2AA3Q6FI13 130 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 ADGRD1Q6QNK2 874 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 TNS4Q8IZW8 715 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 FBXO22Q8NEZ5 403 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 STAG3L4Q8TBR4 150 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 TRIB2Q92519 343 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 CD101Q93033 1021 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 PANX3Q96QZ0 392 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 PRPF18Q99633 342 aaKnown RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 ECSITQ9BQ95 431 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 HAPLN2Q9GZV7 340 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 GBA3Q9H227 469 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 ASB8Q9H765 288 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 SLC17A7Q9P2U7 560 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 FAM237BA0A1B0GVD1 139 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 GLUD1P00367 558 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 C1RP00736 705 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 RPL17P18621 184 aaKnown RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 TACR2P21452 398 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 ATP5F1P24539 256 aaPredicted RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 WNT7BP56706 349 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 HNRNPDQ14103 355 aaKnown RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 BNC2Q6ZN30 1099 aaPredicted RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 USP45Q70EL2 814 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 POU5F2Q8N7G0 328 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 MAB21L3Q8N8X9 362 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 ZNF398Q8TD17 642 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 NRBF2Q96F24 287 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 TMEM237Q96Q45 408 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 NDNQ99608 321 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 ADAMTS10Q9H324 1103 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 POMKQ9H5K3 350 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 ALG9Q9H6U8 611 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 PTPRHQ9HD43 1115 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 IRAK2O43187 625 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 TLL1O43897 1013 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 TMEM63AO94886 807 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 CORO1AP31146 461 aaKnown RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 RPL14P50914 215 aaKnown RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 SLC25A11Q02978 314 aaKnown RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 NR6A1Q15406 480 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 RFWD3Q6PCD5 774 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms