RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ARID3BQ8IVW6 561 aaPredicted RBP15.1■□□□□ 0.01
PHF3-209ENST00000509330 SLC22A12Q96S37 553 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 CPNE1Q99829 537 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 UBE2OQ9C0C9 1292 aaKnown RBP15.1■□□□□ 0.01
PHF3-209ENST00000509330 UXTQ9UBK9 157 aaPredicted RBP15.1■□□□□ 0.01
PHF3-209ENST00000509330 PRRC2BQ5JSZ5 2229 aaKnown RBP15.1■□□□□ 0.01
PHF3-209ENST00000509330 CBX6O95503 412 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 TROVE2P10155 538 aaKnown RBP eCLIP15.09■□□□□ 0.01
PHF3-209ENST00000509330 HMGA1P17096 107 aaKnown RBP15.09■□□□□ 0.01
PHF3-209ENST00000509330 CRHR1P34998 444 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 HARS2P49590 506 aaKnown RBP15.09■□□□□ 0.01
PHF3-209ENST00000509330 RENBPP51606 427 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 KCNJ2P63252 427 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 ANO4Q32M45 955 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 HECTD3Q5T447 861 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 ZNF461Q8TAF7 563 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 AGR3Q8TD06 166 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 TOP1MTQ969P6 601 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 GRAMD1AQ96CP6 724 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 ZNF558Q96NG5 402 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 LRRC37BQ96QE4 947 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 YME1L1Q96TA2 773 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 KCTD3Q9Y597 815 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 TRIM43BA6NCK2 446 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 TUFMP49411 452 aaKnown RBP15.09■□□□□ 0.01
PHF3-209ENST00000509330 GALNT3Q14435 633 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 PKN3Q6P5Z2 889 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 PPHLN1Q8NEY8 458 aaKnown RBP15.09■□□□□ 0.01
PHF3-209ENST00000509330 NSMCE1Q8WV22 266 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 TRIM43Q96BQ3 446 aaPredicted RBP15.09■□□□□ 0.01
PHF3-209ENST00000509330 VPS39Q96JC1 886 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 SEMA3CQ99985 751 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 RXFP1Q9HBX9 757 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 SLC12A4Q9UP95 1085 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 STK38LQ9Y2H1 464 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 USH1CQ9Y6N9 552 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 MICAL3Q7RTP6 2002 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 A0A096LPK6 155 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 SOD2P04179 222 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 ZDHHC11BP0C7U3 371 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 SPRP35270 261 aaPredicted RBP15.09■□□□□ 0.01
PHF3-209ENST00000509330 PCID2Q5JVF3 399 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 SLC41A1Q8IVJ1 513 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 SMIM14Q96QK8 99 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 TMEM120AQ9BXJ8 343 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 TRIM55Q9BYV6 548 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 ACTR5Q9H9F9 607 aaPredicted RBP15.09■□□□□ 0.01
PHF3-209ENST00000509330 SLC40A1Q9NP59 571 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 TRPM5Q9NZQ8 1165 aa15.09■□□□□ 0.01
PHF3-209ENST00000509330 OR51F1A6NGY5 319 aa15.08■□□□□ 0
PHF3-209ENST00000509330 ITM2AO43736 263 aa15.08■□□□□ 0
PHF3-209ENST00000509330 ACSL4O60488 711 aa15.08■□□□□ 0
PHF3-209ENST00000509330 IGLV3-27P01718 113 aa15.08■□□□□ 0
PHF3-209ENST00000509330 GJA1P17302 382 aa15.08■□□□□ 0
PHF3-209ENST00000509330 GABRB3P28472 473 aa15.08■□□□□ 0
PHF3-209ENST00000509330 NDST2P52849 883 aa15.08■□□□□ 0
PHF3-209ENST00000509330 LIMK2P53671 638 aa15.08■□□□□ 0
PHF3-209ENST00000509330 NCALDP61601 193 aa15.08■□□□□ 0
PHF3-209ENST00000509330 HNRNPDQ14103 355 aaKnown RBP15.08■□□□□ 0
PHF3-209ENST00000509330 ZNF235Q14590 738 aa15.08■□□□□ 0
PHF3-209ENST00000509330 SETDB1Q15047 1291 aa15.08■□□□□ 0
PHF3-209ENST00000509330 LACTB2Q53H82 288 aaPredicted RBP15.08■□□□□ 0
PHF3-209ENST00000509330 TAF1BQ53T94 588 aaPredicted RBP15.08■□□□□ 0
PHF3-209ENST00000509330 GRTP1Q5TC63 336 aa15.08■□□□□ 0
PHF3-209ENST00000509330 ZNF470Q6ECI4 717 aa15.08■□□□□ 0
PHF3-209ENST00000509330 C10orf107Q8IVU9 208 aa15.08■□□□□ 0
PHF3-209ENST00000509330 PRICKLE1Q96MT3 831 aaPredicted RBP15.08■□□□□ 0
PHF3-209ENST00000509330 AFF4Q9UHB7 1163 aaKnown RBP15.08■□□□□ 0
PHF3-209ENST00000509330 HAO1Q9UJM8 370 aa15.08■□□□□ 0
PHF3-209ENST00000509330 FNDC3AQ9Y2H6 1198 aaKnown RBP15.08■□□□□ 0
PHF3-209ENST00000509330 PLXNA3P51805 1871 aa15.08■□□□□ 0
PHF3-209ENST00000509330 IGLV3-10A0A075B6K4 115 aa15.08■□□□□ 0
PHF3-209ENST00000509330 CACNG3O60359 315 aa15.08■□□□□ 0
PHF3-209ENST00000509330 URODP06132 367 aa15.08■□□□□ 0
PHF3-209ENST00000509330 BPGMP07738 259 aa15.08■□□□□ 0
PHF3-209ENST00000509330 MYL2P10916 166 aa15.08■□□□□ 0
PHF3-209ENST00000509330 RAG1P15918 1043 aa15.08■□□□□ 0
PHF3-209ENST00000509330 ARNTP27540 789 aa15.08■□□□□ 0
PHF3-209ENST00000509330 ELF1P32519 619 aa15.08■□□□□ 0
PHF3-209ENST00000509330 HTR7P34969 479 aa15.08■□□□□ 0
PHF3-209ENST00000509330 ADRA1AP35348 466 aa15.08■□□□□ 0
PHF3-209ENST00000509330 LBRQ14739 615 aaKnown RBP15.08■□□□□ 0
PHF3-209ENST00000509330 RNF43Q68DV7 783 aa15.08■□□□□ 0
PHF3-209ENST00000509330 TXNDC8Q6A555 127 aa15.08■□□□□ 0
PHF3-209ENST00000509330 LINGO4Q6UY18 593 aa15.08■□□□□ 0
PHF3-209ENST00000509330 CYS1Q717R9 158 aa15.08■□□□□ 0
PHF3-209ENST00000509330 PTAR1Q7Z6K3 402 aaPredicted RBP15.08■□□□□ 0
PHF3-209ENST00000509330 TTC7BQ86TV6 843 aa15.08■□□□□ 0
PHF3-209ENST00000509330 GPATCH11Q8N954 259 aa15.08■□□□□ 0
PHF3-209ENST00000509330 BLOC1S5Q8TDH9 187 aa15.08■□□□□ 0
PHF3-209ENST00000509330 NDNQ99608 321 aa15.08■□□□□ 0
PHF3-209ENST00000509330 ZNF212Q9UDV6 495 aa15.08■□□□□ 0
PHF3-209ENST00000509330 WASH4PA8MWX3 477 aa15.07■□□□□ 0
PHF3-209ENST00000509330 CBX4O00257 560 aa15.07■□□□□ 0
PHF3-209ENST00000509330 AHSGP02765 367 aa15.07■□□□□ 0
PHF3-209ENST00000509330 MMP2P08253 660 aa15.07■□□□□ 0
PHF3-209ENST00000509330 SERPINB3P29508 390 aa15.07■□□□□ 0
PHF3-209ENST00000509330 ALDH3A1P30838 453 aa15.07■□□□□ 0
PHF3-209ENST00000509330 ARFIP2P53365 341 aa15.07■□□□□ 0
PHF3-209ENST00000509330 NRG1Q02297 640 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms