RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 CLDN11O75508 207 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 PROCP04070 461 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 NQO1P15559 274 aaKnown RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 LAG3P18627 525 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 HLA-DPA1P20036 260 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 OR1E1P30953 314 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 PPM1AP35813 382 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 SERPINH1P50454 418 aaKnown RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 CSRP3P50461 194 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 WNT3AP56704 352 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 DSG1Q02413 1049 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 BST1Q10588 318 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 PLD1Q13393 1074 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 THOC5Q13769 683 aaKnown RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 TSNAXIP1Q2TAA8 658 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 FASTKD1Q53R41 847 aaKnown RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 HSP90AA5PQ58FG0 334 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 N4BP2L1Q5TBK1 243 aaPredicted RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 RAP1GAP2Q684P5 730 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 CYB5D1Q6P9G0 228 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 RSPO2Q6UXX9 243 aaPredicted RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 ARHGAP36Q6ZRI8 547 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 CHST9Q7L1S5 443 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 CLEC14AQ86T13 490 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 SETD3Q86TU7 594 aaPredicted RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 ZC3HC1Q86WB0 502 aaKnown RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 MIB1Q86YT6 1006 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 WDR75Q8IWA0 830 aaKnown RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 CMTR2Q8IYT2 770 aaKnown RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 UNC5BQ8IZJ1 945 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 TTC9BQ8N6N2 239 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 SPATA22Q8NHS9 363 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 USP33Q8TEY7 942 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 MFSD3Q96ES6 412 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 HMCESQ96FZ2 354 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 VPS39Q96JC1 886 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 FEM1CQ96JP0 617 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 MRGPRX2Q96LB1 330 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 ZNF512Q96ME7 567 aaPredicted RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 ZNF558Q96NG5 402 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 NACA2Q9H009 215 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 MYLK2Q9H1R3 596 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 CWH43Q9H720 699 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.37□□□□□ -0.91
HTT-205ENST00000509043 IARS2Q9NSE4 1012 aaKnown RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 KLC4Q9NSK0 619 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 TREX1Q9NSU2 369 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 NDFIP2Q9NV92 336 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 COPG2Q9UBF2 871 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 NUDT5Q9UKK9 219 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 TBX21Q9UL17 535 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 CORO1CQ9ULV4 474 aaPredicted RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 MAGED2Q9UNF1 606 aaPredicted RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 SSX2IPQ9Y2D8 614 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 ARIH1Q9Y4X5 557 aaPredicted RBP9.37□□□□□ -0.91
HTT-205ENST00000509043 PSAT1Q9Y617 370 aa9.37□□□□□ -0.91
HTT-205ENST00000509043 A0A087X1B8 175 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 A0A096LPK6 155 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 LOC285095A0A1B0GVY8 99 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 ILVBLA1L0T0 632 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 ZNF840PA6NDX5 716 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 SLC7A4O43246 635 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 PMPCBO75439 489 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 HAUS5O94927 633 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 MT-CYBP00156 380 aaPredicted RBP9.36□□□□□ -0.91
HTT-205ENST00000509043 FGF1P05230 155 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 CPA3P15088 417 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 ATF6P18850 670 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 NMBRP28336 390 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 OR1D2P34982 312 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 SERPINB5P36952 375 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 SLC26A3P40879 764 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 ALDH1A3P47895 512 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 ARCN1P48444 511 aaKnown RBP9.36□□□□□ -0.91
HTT-205ENST00000509043 GATMP50440 423 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 POU4F1Q01851 419 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 TLE2Q04725 743 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 ZBTB16Q05516 673 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 SLC12A1Q13621 1099 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 RAB33AQ14088 237 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 ZNF235Q14590 738 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 LBRQ14739 615 aaKnown RBP9.36□□□□□ -0.91
HTT-205ENST00000509043 SPRED3Q2MJR0 410 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 PABPC1LQ4VXU2 614 aaKnown RBP9.36□□□□□ -0.91
HTT-205ENST00000509043 ALFQ53S48 1182 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 MBLAC2Q68D91 279 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 CES3Q6UWW8 571 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 CLNKQ7Z7G1 428 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 HERC6Q8IVU3 1022 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 PARP9Q8IXQ6 854 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 KIRREL3Q8IZU9 778 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 SLC39A11Q8N1S5 342 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.36□□□□□ -0.91
HTT-205ENST00000509043 C2CD4AQ8NCU7 369 aaPredicted RBP9.36□□□□□ -0.91
HTT-205ENST00000509043 PIWIL2Q8TC59 973 aaKnown RBP9.36□□□□□ -0.91
HTT-205ENST00000509043 IGSF8Q969P0 613 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 TOP1MTQ969P6 601 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 SKA1Q96BD8 255 aa9.36□□□□□ -0.91
HTT-205ENST00000509043 PABPC5Q96DU9 382 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms