RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 SLC39A14Q15043 492 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 SF3A2Q15428 464 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 KNOP1Q1ED39 458 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 SKIDA1Q1XH10 827 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 INAVAQ3KP66 663 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 HS1BP3Q53T59 392 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 RNF187Q5TA31 235 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 ATL3Q6DD88 541 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 GRAMD4Q6IC98 578 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 KIAA1324Q6UXG2 1013 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 CD300LGQ6UXG3 332 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 SCARA5Q6ZMJ2 495 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 TRAPPC11Q7Z392 1133 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 KBTBD6Q86V97 674 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 PROSER1Q86XN7 944 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 CCDC33Q8N5R6 958 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 TTC9BQ8N6N2 239 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 KIAA1958Q8N8K9 716 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 KYQ8NBH2 561 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 TXNDC5Q8NBS9 432 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 B3GALNT2Q8NCR0 500 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 OR2W6PQ8NHA6 318 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 GANCQ8TET4 914 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 RNF139Q8WU17 664 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 CHAC2Q8WUX2 184 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 CHTF18Q8WVB6 975 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 OVCA2Q8WZ82 227 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 TAF4BQ92750 862 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 ERCC4Q92889 916 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 JAKMIP2Q96AA8 810 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 ZC3H10Q96K80 434 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 CNOT6LQ96LI5 555 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 C8orf48Q96LL4 319 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 CLIC6Q96NY7 704 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 CYP2S1Q96SQ9 504 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 CGRRF1Q99675 332 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 CBWD1Q9BRT8 395 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 BBS2Q9BXC9 721 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 TPSD1Q9BZJ3 242 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 DCLK3Q9C098 648 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 FAM124BQ9H5Z6 455 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 MMRN2Q9H8L6 949 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 PCDH18Q9HCL0 1135 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 BLOC1S4Q9NUP1 217 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 DNAJC17Q9NVM6 304 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 RMND1Q9NWS8 449 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 COMMD8Q9NX08 183 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 H2AFY2Q9P0M6 372 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 HESX1Q9UBX0 185 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 USP25Q9UHP3 1055 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 CROTQ9UKG9 612 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 L1RE1Q9UN81 338 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 MAPRE3Q9UPY8 281 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 CCL26Q9Y258 94 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 INVSQ9Y283 1065 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 ZNF510Q9Y2H8 683 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 PRKAB1Q9Y478 270 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 CEP83Q9Y592 693 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 B3GALT1Q9Y5Z6 326 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 STYXL1Q9Y6J8 313 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 MYH11P35749 1972 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 EP300Q09472 2414 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 PATJQ8NI35 1801 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 A0A1B0GTL3 188 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 PVALEFA0A1B0GWK0 134 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 E2F8A0AVK6 867 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 C2orf78A6NCI8 922 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 TMEM8BA6NDV4 472 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 ZNF839A8K0R7 811 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 TISP43B9A030 160 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 NEDD8-MDP1E9PL57 170 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 H0Y626 953 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 K7ESF4 209 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 DVL2O14641 736 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 NPC1O15118 1278 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 CLIC2O15247 247 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 RNASEH1O60930 286 aaKnown RBP3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 TACC1O75410 805 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 MOSPD3O75425 235 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 KCNK5O95279 499 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 SMC2O95347 1197 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 TRIM16O95361 564 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 YEATS4O95619 227 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 MYL1P05976 194 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 ADRB2P07550 413 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 EPB41P11171 864 aaKnown RBP3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 CEACAM1P13688 526 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 CFPP27918 469 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 ADORA2BP29275 332 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 OXTRP30559 389 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 HOXD12P35452 270 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 SOX5P35711 763 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 CHKAP35790 457 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 EIF2DP41214 584 aaKnown RBP3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 HARS2P49590 506 aaKnown RBP3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 GPR15P49685 360 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 CDH8P55286 799 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 ST8SIA6P61647 398 aa3.94□□□□□ -1.78
HMGN1P11-201ENST00000508668 KRT85P78386 507 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms