RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ITM2CQ9NQX7 267 aa5.35□□□□□ -1.55
DHFR-204ENST00000508282 DHX16O60231 1041 aaKnown RBP5.34□□□□□ -1.55
DHFR-204ENST00000508282 TNNT1P13805 278 aa5.34□□□□□ -1.55
DHFR-204ENST00000508282 RFC1P35251 1148 aaPredicted RBP5.34□□□□□ -1.55
DHFR-204ENST00000508282 RPE65Q16518 533 aa5.34□□□□□ -1.55
DHFR-204ENST00000508282 GRAMD1BQ3KR37 738 aa5.34□□□□□ -1.55
DHFR-204ENST00000508282 FSCBQ5H9T9 825 aa5.34□□□□□ -1.55
DHFR-204ENST00000508282 NAPEPLDQ6IQ20 393 aa5.34□□□□□ -1.55
DHFR-204ENST00000508282 GJB7Q6PEY0 223 aa5.34□□□□□ -1.55
DHFR-204ENST00000508282 ADHFE1Q8IWW8 467 aa5.34□□□□□ -1.55
DHFR-204ENST00000508282 CEP70Q8NHQ1 597 aa5.34□□□□□ -1.55
DHFR-204ENST00000508282 PHF21BQ96EK2 531 aa5.34□□□□□ -1.55
DHFR-204ENST00000508282 LHPPQ9H008 270 aa5.34□□□□□ -1.55
DHFR-204ENST00000508282 FBXO40Q9UH90 709 aa5.34□□□□□ -1.55
DHFR-204ENST00000508282 VWA5AO00534 786 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 SOX30O94993 753 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 CD72P21854 359 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 HNF1BP35680 557 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 FBXO43Q4G163 708 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 DENND1BQ6P3S1 775 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 ANKRD44Q8N8A2 993 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 TEX45Q8NA69 505 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 OR4N2Q8NGD1 307 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 TMEM163Q8TC26 289 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 RASSF1Q9NS23 344 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 ATP8A2Q9NTI2 1148 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 SELENONQ9NZV5 590 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 WNT16Q9UBV4 365 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 RRP7AQ9Y3A4 280 aaKnown RBP5.33□□□□□ -1.56
DHFR-204ENST00000508282 CLDN16Q9Y5I7 305 aa5.33□□□□□ -1.56
DHFR-204ENST00000508282 ARID4BQ4LE39 1312 aaPredicted RBP5.32□□□□□ -1.56
DHFR-204ENST00000508282 FAM157AC9JC47 383 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 IRAK2O43187 625 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 HBP1O60381 514 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 MMP3P08254 477 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 CBSLP0DN79 551 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 YWHAQP27348 245 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 CBSP35520 551 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 ARL4CP56559 192 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 GOLGA8FQ08AF8 430 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 ATG9BQ674R7 924 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 ZNF324BQ6AW86 544 aaPredicted RBP5.32□□□□□ -1.56
DHFR-204ENST00000508282 C2CD5Q86YS7 1000 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 TMC8Q8IU68 726 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 SPATA5Q8NB90 893 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 NUDCD2Q8WVJ2 157 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 ATOH1Q92858 354 aaPredicted RBP5.32□□□□□ -1.56
DHFR-204ENST00000508282 MED30Q96HR3 178 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 GFM1Q96RP9 751 aaKnown RBP5.32□□□□□ -1.56
DHFR-204ENST00000508282 MEIS3Q99687 375 aa5.32□□□□□ -1.56
DHFR-204ENST00000508282 NPLQ9BXD5 320 aaPredicted RBP5.32□□□□□ -1.56
DHFR-204ENST00000508282 EYA2O00167 538 aa5.31□□□□□ -1.56
DHFR-204ENST00000508282 PIP5K1CO60331 668 aa5.31□□□□□ -1.56
DHFR-204ENST00000508282 ME3Q16798 604 aa5.31□□□□□ -1.56
DHFR-204ENST00000508282 ANKRD45Q5TZF3 282 aa5.31□□□□□ -1.56
DHFR-204ENST00000508282 FAM83HQ6ZRV2 1179 aaPredicted RBP5.31□□□□□ -1.56
DHFR-204ENST00000508282 RBM23Q86U06 439 aaKnown RBP5.31□□□□□ -1.56
DHFR-204ENST00000508282 RBFAQ8N0V3 343 aa5.31□□□□□ -1.56
DHFR-204ENST00000508282 TMEM18Q96B42 140 aa5.31□□□□□ -1.56
DHFR-204ENST00000508282 COG8Q96MW5 612 aa5.31□□□□□ -1.56
DHFR-204ENST00000508282 CTAGE1Q96RT6 745 aa5.31□□□□□ -1.56
DHFR-204ENST00000508282 SEZ6LQ9BYH1 1024 aa5.31□□□□□ -1.56
DHFR-204ENST00000508282 SLCO5A1Q9H2Y9 848 aa5.31□□□□□ -1.56
DHFR-204ENST00000508282 TTC12Q9H892 705 aaPredicted RBP5.31□□□□□ -1.56
DHFR-204ENST00000508282 WDR6Q9NNW5 1121 aaKnown RBP5.31□□□□□ -1.56
DHFR-204ENST00000508282 WWOXQ9NZC7 414 aa5.31□□□□□ -1.56
DHFR-204ENST00000508282 PCDHGB3Q9Y5G1 929 aa5.31□□□□□ -1.56
DHFR-204ENST00000508282 SRPRBQ9Y5M8 271 aaKnown RBP5.31□□□□□ -1.56
DHFR-204ENST00000508282 MORC2Q9Y6X9 1032 aaPredicted RBP5.31□□□□□ -1.56
DHFR-204ENST00000508282 KIF1CO43896 1103 aaKnown RBP5.3□□□□□ -1.56
DHFR-204ENST00000508282 SERPINC1P01008 464 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 IL1AP01583 271 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 CNPP09543 421 aaKnown RBP5.3□□□□□ -1.56
DHFR-204ENST00000508282 DCTDP32321 178 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 NUDT6P53370 316 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 DSCR9P59020 149 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 DSC1Q08554 894 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 KEAP1Q14145 624 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 SHBQ15464 509 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 C8orf82Q6P1X6 216 aaPredicted RBP5.3□□□□□ -1.56
DHFR-204ENST00000508282 RBMXL3Q8N7X1 1067 aaKnown RBP5.3□□□□□ -1.56
DHFR-204ENST00000508282 MIGA1Q8NAN2 632 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 NEXN-AS1Q8NBZ9 246 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 GPT2Q8TD30 523 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 CLSTN3Q9BQT9 956 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 MSTO1Q9BUK6 570 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 NPFFR1Q9GZQ6 430 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 STN1Q9H668 368 aaKnown RBP5.3□□□□□ -1.56
DHFR-204ENST00000508282 CD93Q9NPY3 652 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 IL36RNQ9UBH0 155 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 GDAQ9Y2T3 454 aa5.3□□□□□ -1.56
DHFR-204ENST00000508282 A0A096LPK6 155 aa5.29□□□□□ -1.56
DHFR-204ENST00000508282 VWA3AA6NCI4 1184 aa5.29□□□□□ -1.56
DHFR-204ENST00000508282 ASAP2O43150 1006 aa5.29□□□□□ -1.56
DHFR-204ENST00000508282 EIF5BO60841 1220 aaKnown RBP5.29□□□□□ -1.56
DHFR-204ENST00000508282 GLUD1P00367 558 aa5.29□□□□□ -1.56
DHFR-204ENST00000508282 ADAP00813 363 aa5.29□□□□□ -1.56
DHFR-204ENST00000508282 NAGAP17050 411 aa5.29□□□□□ -1.56
DHFR-204ENST00000508282 HALP42357 657 aa5.29□□□□□ -1.56
DHFR-204ENST00000508282 GPR12P47775 334 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms