RNA–Protein interactions for RNA: ENST00000507487.5

CAST-218, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-218	ENST00000507487	VAT1	Q99536	393 aa		11.99	□□□□□ -0.49
CAST-218	ENST00000507487	AP1M1	Q9BXS5	423 aa		11.99	□□□□□ -0.49
CAST-218	ENST00000507487	RBM22	Q9NW64	420 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
CAST-218	ENST00000507487	SEPT10	Q9P0V9	454 aa		11.99	□□□□□ -0.49
CAST-218	ENST00000507487	CDC23	Q9UJX2	597 aa		11.99	□□□□□ -0.49
CAST-218	ENST00000507487	ZNF148	Q9UQR1	794 aa		11.99	□□□□□ -0.49
CAST-218	ENST00000507487	BDP1	A6H8Y1	2624 aa		11.99	□□□□□ -0.49
CAST-218	ENST00000507487	VCAN	P13611	3396 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	NCOR1	O75376	2440 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	CKAP5	Q14008	2032 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	KCNN4	O15554	427 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	PI15	O43692	258 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	SYNCRIP	O60506	623 aa	Known RBP	11.98	□□□□□ -0.49
CAST-218	ENST00000507487	PHF2	O75151	1096 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	ZNF821	O75541	412 aa	Predicted RBP	11.98	□□□□□ -0.49
CAST-218	ENST00000507487	IGSF6	O95976	241 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	ITGAV	P06756	1048 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	PTPN3	P26045	913 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	STIP1	P31948	543 aa	Known RBP	11.98	□□□□□ -0.49
CAST-218	ENST00000507487	CSNK1D	P48730	415 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	SNRPD1	P62314	119 aa	Known RBP	11.98	□□□□□ -0.49
CAST-218	ENST00000507487	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
CAST-218	ENST00000507487	CAMK2G	Q13555	558 aa	Predicted RBP	11.98	□□□□□ -0.49
CAST-218	ENST00000507487	SNX1	Q13596	522 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	GAS6	Q14393	721 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	TEX44	Q53QW1	395 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	C9orf64	Q5T6V5	341 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	PKN3	Q6P5Z2	889 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487		Q6ZVU0	165 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	SPEM1	Q8N4L4	309 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	ZNF366	Q8N895	744 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	TSEN2	Q8NCE0	465 aa	Known RBP	11.98	□□□□□ -0.49
CAST-218	ENST00000507487	OR2AP1	Q8NGE2	309 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	MAGOHB	Q96A72	148 aa	Known RBP	11.98	□□□□□ -0.49
CAST-218	ENST00000507487	GDAP1L1	Q96MZ0	367 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	TNKS2	Q9H2K2	1166 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	C10orf88	Q9H8K7	445 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	USP29	Q9HBJ7	922 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	NT5M	Q9NPB1	228 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	PRSS16	Q9NQE7	514 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	DLGAP2	Q9P1A6	1054 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	LHX3	Q9UBR4	397 aa		11.98	□□□□□ -0.49
CAST-218	ENST00000507487	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.98	□□□□□ -0.49
CAST-218	ENST00000507487	CCDC188	H7C350	402 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	RNF103	O00237	685 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	PDE2A	O00408	941 aa	Predicted RBP	11.97	□□□□□ -0.49
CAST-218	ENST00000507487	BNIP3L	O60238	219 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	SIN3B	O75182	1162 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	STK10	O94804	968 aa	Known RBP	11.97	□□□□□ -0.49
CAST-218	ENST00000507487	CES1	P23141	567 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	COIL	P38432	576 aa	Predicted RBP	11.97	□□□□□ -0.49
CAST-218	ENST00000507487	DGKE	P52429	567 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	LMNB2	Q03252	620 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	RAD51	Q06609	339 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	CKAP4	Q07065	602 aa	Known RBP	11.97	□□□□□ -0.49
CAST-218	ENST00000507487	ITK	Q08881	620 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	WASHC5	Q12768	1159 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	ZBTB17	Q13105	803 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	MTAP	Q13126	283 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	CRY1	Q16526	586 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	WHAMMP3	Q1A5X7	153 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	TMEM92	Q6UXU6	159 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	MAMSTR	Q6ZN01	415 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	PGBD5	Q8N414	524 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	FBXL6	Q8N531	539 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	OR2A12	Q8NGT7	310 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	ATL2	Q8NHH9	583 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	TEKT5	Q96M29	485 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	MGME1	Q9BQP7	344 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	TMEM121	Q9BTD3	319 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	CEP41	Q9BYV8	373 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	TM6SF2	Q9BZW4	377 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	POLR1E	Q9GZS1	481 aa	Known RBP	11.97	□□□□□ -0.49
CAST-218	ENST00000507487	MTG2	Q9H4K7	406 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	FBRS	Q9HAH7	460 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	POLM	Q9NP87	494 aa	Predicted RBP	11.97	□□□□□ -0.49
CAST-218	ENST00000507487	HECA	Q9UBI9	543 aa	Predicted RBP	11.97	□□□□□ -0.49
CAST-218	ENST00000507487	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.97	□□□□□ -0.49
CAST-218	ENST00000507487	TRHDE	Q9UKU6	1024 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487	ATP8A1	Q9Y2Q0	1164 aa		11.97	□□□□□ -0.49
CAST-218	ENST00000507487		A0A1W2PQF6	199 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	C5orf60	A6NFR6	353 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	MUSK	O15146	869 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	ALOX15B	O15296	676 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	ZBTB24	O43167	697 aa	Predicted RBP	11.96	□□□□□ -0.49
CAST-218	ENST00000507487	GCAT	O75600	419 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	POP4	O95707	220 aa	Known RBP	11.96	□□□□□ -0.49
CAST-218	ENST00000507487	HLA-DQB2	P05538	268 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	COL9A1	P20849	921 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	CHRNA3	P32297	505 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	ACTN2	P35609	894 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	KCNJ1	P48048	391 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	FNTA	P49354	379 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	SCNN1B	P51168	640 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	CCNH	P51946	323 aa	Predicted RBP	11.96	□□□□□ -0.49
CAST-218	ENST00000507487	ELAVL3	Q14576	367 aa	Known RBP	11.96	□□□□□ -0.49
CAST-218	ENST00000507487	GRM3	Q14832	879 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	MYLK3	Q32MK0	819 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	RALGPS1	Q5JS13	557 aa		11.96	□□□□□ -0.49
CAST-218	ENST00000507487	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms