RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 HECAQ9UBI9 543 aaPredicted RBP12.29□□□□□ -0.44
PDLIM7-214ENST00000505746 ZFR2Q9UPR6 939 aaKnown RBP12.29□□□□□ -0.44
PDLIM7-214ENST00000505746 FCF1Q9Y324 198 aaKnown RBP12.29□□□□□ -0.44
PDLIM7-214ENST00000505746 HS3ST3A1Q9Y663 406 aa12.29□□□□□ -0.44
PDLIM7-214ENST00000505746 IGF2RP11717 2491 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 A6NNZ2 444 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 RNF103O00237 685 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 SIGLEC6O43699 453 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 RAMP2O60895 175 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 CALB1P05937 261 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 PLEKP08567 350 aaPredicted RBP12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 ALPPL2P10696 532 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 UNGP13051 313 aaPredicted RBP12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 DGKAP23743 735 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 ACP1P24666 158 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 ACVRL1P37023 503 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 COPB1P53618 953 aaKnown RBP12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 GSCP56915 257 aaPredicted RBP12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 E2F1Q01094 437 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 TARDBPQ13148 414 aaKnown RBP eCLIP12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 MAPK8IP2Q13387 824 aaPredicted RBP12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 POLD3Q15054 466 aaPredicted RBP12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 COL28A1Q2UY09 1125 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 PROX2Q3B8N5 592 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 TMEM259Q4ZIN3 620 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 HES3Q5TGS1 186 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 SEL1L3Q68CR1 1132 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 RBM43Q6ZSC3 357 aaKnown RBP12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 ABI3BPQ7Z7G0 1075 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 NLRP14Q86W24 1093 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 CACTIN-AS1Q8N1I8 211 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 SLC25A45Q8N413 288 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 RYBPQ8N488 228 aaPredicted RBP12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 OR13H1Q8NG92 308 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 JOSD2Q8TAC2 188 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 GPT2Q8TD30 523 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 FAM172AQ8WUF8 416 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 HNRNPLLQ8WVV9 542 aaKnown RBP12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 NTAN1Q96AB6 310 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 RAB7BQ96AH8 199 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 TBC1D31Q96DN5 1066 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 ZDHHC6Q9H6R6 413 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 ANO10Q9NW15 660 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 LIMA1Q9UHB6 759 aaKnown RBP12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 DNAI1Q9UI46 699 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 SIK3Q9Y2K2 1263 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 FADS3Q9Y5Q0 445 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 SPEGQ15772 3267 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 ZZEF1O43149 2961 aa12.28□□□□□ -0.44
PDLIM7-214ENST00000505746 COL5A1P20908 1838 aaPredicted RBP12.27□□□□□ -0.44
PDLIM7-214ENST00000505746 ANKRD62A6NC57 917 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 NEMP2A6NFY4 417 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 ZSCAN5CA6NGD5 496 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 FAM72CH0Y354 149 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 TRIM38O00635 465 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 NEMP1O14524 444 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 EPHB6O15197 1021 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 TSPAN6O43657 245 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 LRIG2O94898 1065 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 CD160O95971 181 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 PAK4O96013 591 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 GSRP00390 522 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 CDK11BP21127 795 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 GPD1P21695 349 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 RFC1P35251 1148 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 HDAC4P56524 1084 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 CLDN2P57739 230 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 SNRPD1P62314 119 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 DAB2P98082 770 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 MYL5Q02045 173 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 UBXN1Q04323 297 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 PTP4A2Q12974 167 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 SGCGQ13326 291 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 CLEC16AQ2KHT3 1053 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 RAB6CQ53S08 254 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 FAM72AQ5TYM5 149 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 FAM72DQ6L9T8 149 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 GCNT7Q6ZNI0 430 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 Q6ZSR6 202 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 SLFN11Q7Z7L1 901 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 PDZD3Q86UT5 571 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 FAM72BQ86X60 149 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 PHF13Q86YI8 300 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 C3orf20Q8ND61 904 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 OR2AP1Q8NGE2 309 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 OR4C6Q8NH72 309 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 ARHGEF26Q96DR7 871 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 GBP4Q96PP9 640 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 LENG8Q96PV6 779 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 PCDHB18PQ96TA0 734 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 OSBPL1AQ9BXW6 950 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 TM6SF2Q9BZW4 377 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 NRSN2Q9GZP1 204 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 RAB6CQ9H0N0 254 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 NDFIP2Q9NV92 336 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 SEPT11Q9NVA2 429 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 AK5Q9Y6K8 562 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 WDFY3Q8IZQ1 3526 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 CHD6Q8TD26 2715 aa12.27□□□□□ -0.45
PDLIM7-214ENST00000505746 PLXNA2O75051 1894 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms