RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CREMQ03060 361 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 SF3A3Q12874 501 aaKnown RBP eCLIP17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 VEPH1Q14D04 833 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 FASTKD1Q53R41 847 aaKnown RBP17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 ALFQ53S48 1182 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 TAF1BQ53T94 588 aaPredicted RBP17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 PRSS55Q6UWB4 352 aaPredicted RBP17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 ASRGL1Q7L266 308 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 TMEM173Q86WV6 379 aaPredicted RBP17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 BCL7CQ8WUZ0 217 aaPredicted RBP17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 IGSF8Q969P0 613 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 VPS39Q96JC1 886 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 ZNF558Q96NG5 402 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 BEGAINQ9BUH8 593 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 IARS2Q9NSE4 1012 aaKnown RBP17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 TREX1Q9NSU2 369 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 TRPM5Q9NZQ8 1165 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 UXTQ9UBK9 157 aaPredicted RBP17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 TBX21Q9UL17 535 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 NUP205Q92621 2012 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 DOCK4Q8N1I0 1966 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 PRAMEF11O60813 436 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 TBX18O95935 607 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 NQO1P15559 274 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 OR1E1P30953 314 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 OR1D2P34982 312 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 CDH4P55283 916 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 DSG1Q02413 1049 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 RIPK1Q13546 671 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 RFTN1Q14699 578 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 TAS1R1Q7RTX1 841 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 TFAP2DQ7Z6R9 452 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 GPR152Q8TDT2 470 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 ZNF512Q96ME7 567 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 POLR1EQ9GZS1 481 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 NACA2Q9H009 215 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 LRMDAQ9H2I8 198 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 ALG13Q9NP73 1137 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 KLC4Q9NSK0 619 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 NYNRINQ9P2P1 1898 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 TRAFD1O14545 582 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 SOAT2O75908 522 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 TPH1P17752 444 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 LAG3P18627 525 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 ETFBP38117 255 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 SERPINH1P50454 418 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 KPNA2P52292 529 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 TLE2Q04725 743 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 THOC5Q13769 683 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 TBCCQ15814 346 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 ALG1LQ6GMV1 187 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 CYB5D1Q6P9G0 228 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 CHST9Q7L1S5 443 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 CLEC14AQ86T13 490 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 ZC3HC1Q86WB0 502 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 PPP4R1Q8TF05 950 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 GIPC2Q8TF65 315 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 PPP1R12CQ9BZL4 782 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 CCSER2Q9H7U1 834 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 NT5MQ9NPB1 228 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 COPG2Q9UBF2 871 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 TLK1Q9UKI8 766 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 EMCNQ9ULC0 261 aa17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 MAGED2Q9UNF1 606 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC11-204ENST00000505676 A0A096LPK6 155 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 ZNF840PA6NDX5 716 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 PMPCBO75439 489 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 CNTN5O94779 1100 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 CES1P23141 567 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 ALDH1A3P47895 512 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 CSRP3P50461 194 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 LBRQ14739 615 aaKnown RBP17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 MBLAC2Q68D91 279 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 WDR75Q8IWA0 830 aaKnown RBP17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 CMTR2Q8IYT2 770 aaKnown RBP17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 TMEM169Q96HH4 297 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 ZNF419Q96HQ0 510 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 AGAP2Q99490 1192 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 TMEM120AQ9BXJ8 343 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 SLC17A6Q9P2U8 582 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 LNPEPQ9UIQ6 1025 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 RIMKLBQ9ULI2 386 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 SORCS3Q9UPU3 1222 aa17.5■□□□□ 0.39
TRAPPC11-204ENST00000505676 A0A0G2JND7 137 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 CLDN11O75508 207 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 SNUPNO95149 360 aaKnown RBP17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 HLA-DPA1P20036 260 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 CRABP2P29373 138 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 ARCN1P48444 511 aaKnown RBP17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 POU6F1Q14863 301 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 KRT72Q14CN4 511 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 TRIM60Q495X7 471 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 DEFB128Q7Z7B8 93 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 PACS2Q86VP3 889 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 ANKLE1Q8NAG6 615 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 TOP1MTQ969P6 601 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 SKA1Q96BD8 255 aa17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 PABPC5Q96DU9 382 aaKnown RBP17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC11-204ENST00000505676 HCSTQ9UBK5 93 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms