RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 MUC3BQ9H195 1237 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 UPF2Q9HAU5 1272 aaKnown RBP16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 LRRC4CQ9HCJ2 640 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 GULP1Q9UBP9 304 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 ANAPC2Q9UJX6 822 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 DOLKQ9UPQ8 538 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 MAPK8IP1Q9UQF2 711 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 LOXL2Q9Y4K0 774 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 UNC13CQ8NB66 2214 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 SPTAN1Q13813 2472 aaKnown RBP16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 PRAMEF33A0A0G2JMD5 474 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 YY2O15391 372 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 PRAMEF10O60809 474 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 MT-CO1P00395 513 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 MYL1P05976 194 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 SLC2A3P11169 496 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 WT1P19544 449 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 RECQLP46063 649 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 ME1P48163 572 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 PFN3P60673 137 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 CCL7P80098 99 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 CENPCQ03188 943 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 NCAPHQ15003 741 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 LRRK1Q38SD2 2015 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 TPRG1LQ5T0D9 272 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 FBXL22Q6P050 247 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 BORAQ6PGQ7 559 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 PHACTR4Q8IZ21 702 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 SDR16C5Q8N3Y7 309 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 UBR7Q8N806 425 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 CHST14Q8NCH0 376 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 SCG3Q8WXD2 468 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 CCDC74AQ96AQ1 378 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 TMEM159Q96B96 161 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 KLF6Q99612 283 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 LRRC61Q9BV99 259 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 TCEAL2Q9H3H9 227 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 ST7Q9NRC1 585 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 COQ4Q9Y3A0 265 aa16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 USP9YO00507 2555 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-210ENST00000503827 A0A1W2PQ27 194 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 A0A1W2PQ64 194 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 A0A1W2PQC6 194 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 M0QYT0 321 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 RNF103O00237 685 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 ACTN4O43707 911 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 LEFTY1O75610 366 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 IGLV3-25P01717 112 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 RPLP0P05388 317 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 EPB41P11171 864 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 ADRB3P13945 408 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 ITIH1P19827 911 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 CD82P27701 267 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 LRMPQ12912 555 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 KCNAB2Q13303 367 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 CBWD6Q4V339 395 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 CBWD3Q5JTY5 395 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 CBWD5Q5RIA9 395 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 FAXCQ5TGI0 409 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 TCERG1LQ5VWI1 586 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 DTX1Q86Y01 620 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 ARL10Q8N8L6 244 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 C2orf49Q9BVC5 232 aaPredicted RBP16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 CPEB1Q9BZB8 566 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 POPDC2Q9HBU9 364 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 RABGEF1Q9UJ41 708 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 TUBD1Q9UJT1 453 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 PCDHA7Q9UN72 937 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 PCDHB4Q9Y5E5 795 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 FADS3Q9Y5Q0 445 aa16.14■□□□□ 0.17
PDLIM7-210ENST00000503827 A0A1W2PQM1 296 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 K7ERQ8 282 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 AP1G1O43747 822 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 CLDN11O75508 207 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 TSHRP16473 764 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 RRM1P23921 792 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 BRD2P25440 801 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 CCR1P32246 355 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 ACADSBP45954 432 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 CLCN6P51797 869 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 DCAF17Q5H9S7 520 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 GUF1Q8N442 669 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 DENND6BQ8NEG7 585 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 USP7Q93009 1102 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 ZSWIM1Q9BR11 485 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 C1QTNF2Q9BXJ5 285 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 CLPBQ9H078 707 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 LRRN3Q9H3W5 708 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 VANGL2Q9ULK5 521 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 TBC1D30Q9Y2I9 924 aa16.13■□□□□ 0.17
PDLIM7-210ENST00000503827 IGLON5A6NGN9 336 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 SMAD6O43541 496 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 SNAP91O60641 907 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 RHOBTB3O94955 611 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 ITGB7P26010 798 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 L1CAMP32004 1257 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 RPL34P49207 117 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 MAPK10P53779 464 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 POLE2P56282 527 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 YWHAZP63104 245 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms