RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 KDELC1Q6UW63 502 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 RANBP10Q6VN20 620 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 REM2Q8IYK8 340 aaPredicted RBP13.23□□□□□ -0.29
GARNL3-220ENST00000496711 RDH11Q8TC12 318 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 SPPL2BQ8TCT7 592 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 GPR152Q8TDT2 470 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 HMCESQ96FZ2 354 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 B3GALT6Q96L58 329 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 GPR62Q9BZJ7 368 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 PRKD2Q9BZL6 878 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 MMADHCQ9H3L0 296 aaPredicted RBP13.23□□□□□ -0.29
GARNL3-220ENST00000496711 DENND2DQ9H6A0 471 aaPredicted RBP13.23□□□□□ -0.29
GARNL3-220ENST00000496711 SP110Q9HB58 689 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 TREX1Q9NSU2 369 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 TAS2R1Q9NYW7 299 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 TAGLN3Q9UI15 199 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 TLK1Q9UKI8 766 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 PCDHB7Q9Y5E2 793 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 PCDHB12Q9Y5F1 795 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 SCN5AQ14524 2016 aa13.23□□□□□ -0.29
GARNL3-220ENST00000496711 NBNO60934 754 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 SIN3BO75182 1162 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 SOAT2O75908 522 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 GM2AP17900 193 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 ARNTP27540 789 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 ARCN1P48444 511 aaKnown RBP13.22□□□□□ -0.29
GARNL3-220ENST00000496711 RENBPP51606 427 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 WNT3AP56704 352 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 SEPT6Q14141 434 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 USP10Q14694 798 aaKnown RBP13.22□□□□□ -0.29
GARNL3-220ENST00000496711 PCSK7Q16549 785 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 ALFQ53S48 1182 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 ESRP1Q6NXG1 681 aaKnown RBP13.22□□□□□ -0.29
GARNL3-220ENST00000496711 ATG14Q6ZNE5 492 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 MAVSQ7Z434 540 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 MIB1Q86YT6 1006 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 ARHGAP24Q8N264 748 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 IMP4Q96G21 291 aaKnown RBP13.22□□□□□ -0.29
GARNL3-220ENST00000496711 CASD1Q96PB1 797 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 SEPT5Q99719 369 aaPredicted RBP13.22□□□□□ -0.29
GARNL3-220ENST00000496711 FAM167BQ9BTA0 163 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 CFHR5Q9BXR6 569 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 UBE2OQ9C0C9 1292 aaKnown RBP13.22□□□□□ -0.29
GARNL3-220ENST00000496711 TASP1Q9H6P5 420 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 HMX1Q9NP08 348 aaPredicted RBP13.22□□□□□ -0.29
GARNL3-220ENST00000496711 PNPOQ9NVS9 261 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 MARCH2Q9P0N8 246 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 PHF24Q9UPV7 400 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 APOBEC2Q9Y235 224 aaKnown RBP13.22□□□□□ -0.29
GARNL3-220ENST00000496711 C15orf41Q9Y2V0 281 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 TET1Q8NFU7 2136 aa13.22□□□□□ -0.29
GARNL3-220ENST00000496711 SPECC1L-ADORA2AF8WAN1 911 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 ENPP3O14638 875 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 PHGDHO43175 533 aaKnown RBP13.21□□□□□ -0.29
GARNL3-220ENST00000496711 TRIM13O60858 407 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 CNTN5O94779 1100 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 ANP32DO95626 131 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 HSPA4LO95757 839 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 IGLV3-27P01718 113 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 AHSGP02765 367 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 SLC35E2BP0CK96 405 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 DNAJB1P25685 340 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 GABRB3P28472 473 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 SLC1A2P43004 574 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 CHRNA4P43681 627 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 CPA2P48052 419 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 POLD2P49005 469 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 SLC11A1P49279 550 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 GATMP50440 423 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 MPP1Q00013 466 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 TAF10Q12962 218 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 GPR17Q13304 367 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 BFSP2Q13515 415 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 SLC12A1Q13621 1099 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 THOC5Q13769 683 aaKnown RBP13.21□□□□□ -0.29
GARNL3-220ENST00000496711 UBAP2LQ14157 1087 aaKnown RBP13.21□□□□□ -0.29
GARNL3-220ENST00000496711 MGAT5BQ3V5L5 792 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 RABGAP1LQ5R372 815 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 C10orf120Q5SQS8 335 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 RAP1GAP2Q684P5 730 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 FUT10Q6P4F1 479 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 RFWD3Q6PCD5 774 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 DENND6AQ8IWF6 608 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 SPATA17Q96L03 361 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 CAPNS2Q96L46 248 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 NUDCD1Q96RS6 583 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 C1QTNF1Q9BXJ1 281 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 ACE2Q9BYF1 805 aaPredicted RBP13.21□□□□□ -0.29
GARNL3-220ENST00000496711 ATXN3LQ9H3M9 355 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 NT5MQ9NPB1 228 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 VPS45Q9NRW7 570 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 COMMD8Q9NX08 183 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 SLC2A6Q9UGQ3 507 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 LRFN2Q9ULH4 789 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 CDY1Q9Y6F8 540 aa13.21□□□□□ -0.29
GARNL3-220ENST00000496711 FAM95CA0A1B0GW59 222 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 HEATR9A2RTY3 570 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 PRR5-ARHGAP8B1AHC4 643 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 B2RBV5 119 aa13.21□□□□□ -0.3
GARNL3-220ENST00000496711 J3KR12 359 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms