RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 Q0VFX4 171 aa6.04□□□□□ -1.44
SF3B1-212ENST00000496458 HNF4GQ14541 408 aa6.04□□□□□ -1.44
SF3B1-212ENST00000496458 KLHL22Q53GT1 634 aa6.04□□□□□ -1.44
SF3B1-212ENST00000496458 PALB2Q86YC2 1186 aa6.04□□□□□ -1.44
SF3B1-212ENST00000496458 SPATA2LQ8IUW3 424 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-212ENST00000496458 NKAPQ8N5F7 415 aaKnown RBP6.04□□□□□ -1.44
SF3B1-212ENST00000496458 SPATA5Q8NB90 893 aa6.04□□□□□ -1.44
SF3B1-212ENST00000496458 ELP5Q8TE02 316 aa6.04□□□□□ -1.44
SF3B1-212ENST00000496458 ATOH1Q92858 354 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-212ENST00000496458 GFM1Q96RP9 751 aaKnown RBP6.04□□□□□ -1.44
SF3B1-212ENST00000496458 ITM2CQ9NQX7 267 aa6.04□□□□□ -1.44
SF3B1-212ENST00000496458 MMP3P08254 477 aa6.03□□□□□ -1.44
SF3B1-212ENST00000496458 LTBQ06643 244 aa6.03□□□□□ -1.44
SF3B1-212ENST00000496458 ATG9BQ674R7 924 aa6.03□□□□□ -1.44
SF3B1-212ENST00000496458 GJB7Q6PEY0 223 aa6.03□□□□□ -1.44
SF3B1-212ENST00000496458 GHDCQ8N2G8 530 aa6.03□□□□□ -1.44
SF3B1-212ENST00000496458 SETD9Q8NE22 299 aa6.03□□□□□ -1.44
SF3B1-212ENST00000496458 ADAMTS14Q8WXS8 1223 aa6.03□□□□□ -1.44
SF3B1-212ENST00000496458 MED30Q96HR3 178 aa6.03□□□□□ -1.44
SF3B1-212ENST00000496458 SEZ6LQ9BYH1 1024 aa6.03□□□□□ -1.44
SF3B1-212ENST00000496458 WNT16Q9UBV4 365 aa6.03□□□□□ -1.44
SF3B1-212ENST00000496458 FBXO40Q9UH90 709 aa6.03□□□□□ -1.44
SF3B1-212ENST00000496458 CD207Q9UJ71 328 aa6.03□□□□□ -1.44
SF3B1-212ENST00000496458 SRPRBQ9Y5M8 271 aaKnown RBP6.03□□□□□ -1.44
SF3B1-212ENST00000496458 RAI2Q9Y5P3 530 aa6.03□□□□□ -1.44
SF3B1-212ENST00000496458 MORC2Q9Y6X9 1032 aaPredicted RBP6.03□□□□□ -1.44
SF3B1-212ENST00000496458 C4orf47A7E2U8 309 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 EYA2O00167 538 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 KIF1CO43896 1103 aaKnown RBP6.02□□□□□ -1.45
SF3B1-212ENST00000496458 DHX16O60231 1041 aaKnown RBP6.02□□□□□ -1.45
SF3B1-212ENST00000496458 IL1AP01583 271 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 CBSLP0DN79 551 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 GNLYP22749 145 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 CBSP35520 551 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 HNF1BP35680 557 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 DENND1BQ6P3S1 775 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 HERC6Q8IVU3 1022 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 ADHFE1Q8IWW8 467 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 MIGA1Q8NAN2 632 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 PHF21BQ96EK2 531 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 COG8Q96MW5 612 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 NPLQ9BXD5 320 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-212ENST00000496458 RASSF1Q9NS23 344 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 WWOXQ9NZC7 414 aa6.02□□□□□ -1.45
SF3B1-212ENST00000496458 ARID4BQ4LE39 1312 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-212ENST00000496458 PAPOLAP51003 745 aaKnown RBP6.01□□□□□ -1.45
SF3B1-212ENST00000496458 ARL4CP56559 192 aa6.01□□□□□ -1.45
SF3B1-212ENST00000496458 RPE65Q16518 533 aa6.01□□□□□ -1.45
SF3B1-212ENST00000496458 ME3Q16798 604 aa6.01□□□□□ -1.45
SF3B1-212ENST00000496458 FBXO43Q4G163 708 aa6.01□□□□□ -1.45
SF3B1-212ENST00000496458 ZNF324BQ6AW86 544 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-212ENST00000496458 NAPEPLDQ6IQ20 393 aa6.01□□□□□ -1.45
SF3B1-212ENST00000496458 TMC8Q8IU68 726 aa6.01□□□□□ -1.45
SF3B1-212ENST00000496458 CERS3Q8IU89 383 aa6.01□□□□□ -1.45
SF3B1-212ENST00000496458 TMEM18Q96B42 140 aa6.01□□□□□ -1.45
SF3B1-212ENST00000496458 TTC12Q9H892 705 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-212ENST00000496458 NOD2Q9HC29 1040 aa6.01□□□□□ -1.45
SF3B1-212ENST00000496458 ATP8A2Q9NTI2 1148 aa6.01□□□□□ -1.45
SF3B1-212ENST00000496458 SELENONQ9NZV5 590 aa6.01□□□□□ -1.45
SF3B1-212ENST00000496458 GDAQ9Y2T3 454 aa6.01□□□□□ -1.45
SF3B1-212ENST00000496458 A0A096LPK6 155 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 FAM157AC9JC47 383 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 ANP32CO43423 234 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 TGFB3P10600 412 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 DSC1Q08554 894 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 MON1BQ7L1V2 547 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 OR4N2Q8NGD1 307 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 TMEM163Q8TC26 289 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 NUDCD2Q8WVJ2 157 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 WASF1Q92558 559 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 MEIS3Q99687 375 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 NPFFR1Q9GZQ6 430 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 SLCO5A1Q9H2Y9 848 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 STN1Q9H668 368 aaKnown RBP6□□□□□ -1.45
SF3B1-212ENST00000496458 WDR6Q9NNW5 1121 aaKnown RBP6□□□□□ -1.45
SF3B1-212ENST00000496458 SUFUQ9UMX1 484 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 PCDHGB3Q9Y5G1 929 aa6□□□□□ -1.45
SF3B1-212ENST00000496458 PEX12O00623 359 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 ASAP2O43150 1006 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 PIP5K1CO60331 668 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 PAPSS2O95340 614 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-212ENST00000496458 ADAP00813 363 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 PRSS2P07478 247 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 WEE2P0C1S8 567 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 CKMT1AP12532 417 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 NAGAP17050 411 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 HALP42357 657 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 GPR12P47775 334 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 NUDT6P53370 316 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 ANKRD1Q15327 319 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 ASIC2Q16515 512 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 TEX45Q8NA69 505 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 DNAAF1Q8NEP3 725 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 OR14A16Q8NHC5 309 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 RASSF8Q8NHQ8 419 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 TBC1D22AQ8WUA7 517 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 TRIM63Q969Q1 353 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 CTAGE1Q96RT6 745 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 PPCSQ9HAB8 311 aa5.99□□□□□ -1.45
SF3B1-212ENST00000496458 PROCRQ9UNN8 238 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms