RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 DKK4Q9UBT3 224 aa14.71□□□□□ -0.05
CXCL12-208ENST00000496375 FARP1Q9Y4F1 1045 aaPredicted RBP14.71□□□□□ -0.05
CXCL12-208ENST00000496375 PAXBP1Q9Y5B6 917 aa14.71□□□□□ -0.05
CXCL12-208ENST00000496375 PCDHGA1Q9Y5H4 931 aa14.71□□□□□ -0.05
CXCL12-208ENST00000496375 LOC400499M0QZD8 3231 aa14.71□□□□□ -0.06
CXCL12-208ENST00000496375 KNTC1P50748 2209 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 A0A0D9SEW6 157 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 SSU72P8A0A1W2PR75 194 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 DRGXA6NNA5 263 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 PRAMEF26H0Y7S4 382 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 KPNA3O00505 521 aaPredicted RBP14.7□□□□□ -0.06
CXCL12-208ENST00000496375 MAGEC1O60732 1142 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 RNGTTO60942 597 aaKnown RBP14.7□□□□□ -0.06
CXCL12-208ENST00000496375 RFPL3O75679 317 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 ENDOD1O94919 500 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 TPM1P09493 284 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 SKILP12757 684 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 RRM1P23921 792 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 CHRNA3P32297 505 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 FLT3P36888 993 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 ACADVLP49748 655 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 CLDN6P56747 220 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 TAS2R38P59533 333 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 MAPK8IP2Q13387 824 aaPredicted RBP14.7□□□□□ -0.06
CXCL12-208ENST00000496375 COL28A1Q2UY09 1125 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 PIP5KL1Q5T9C9 394 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 TRNP1Q6NT89 227 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 LINGO4Q6UY18 593 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 TFAP2DQ7Z6R9 452 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 TMPRSS12Q86WS5 348 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 CNGA4Q8IV77 575 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 DCAF4L2Q8NA75 395 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 OR2A12Q8NGT7 310 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 HNRNPLLQ8WVV9 542 aaKnown RBP14.7□□□□□ -0.06
CXCL12-208ENST00000496375 ARRDC3Q96B67 414 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 C1orf74Q96LT6 269 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 CCDC114Q96M63 670 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 TAS2R14Q9NYV8 317 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 MPP6Q9NZW5 540 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 CA5BQ9Y2D0 317 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 DOCK4Q8N1I0 1966 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 ATRXP46100 2492 aa14.7□□□□□ -0.06
CXCL12-208ENST00000496375 URB1O60287 2271 aaKnown RBP14.69□□□□□ -0.06
CXCL12-208ENST00000496375 ARID1BQ8NFD5 2236 aaPredicted RBP14.69□□□□□ -0.06
CXCL12-208ENST00000496375 C2CD4BA6NLJ0 364 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 SIGLEC16A6NMB1 481 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 E9PAM4 449 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 GOLGA8SH3BPF8 625 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 SLC31A1O15431 190 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 SMAD6O43541 496 aaKnown RBP14.69□□□□□ -0.06
CXCL12-208ENST00000496375 SRGAP2O75044 1071 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 C1SP09871 688 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 GLDCP23378 1020 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 CDC25BP30305 580 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 OR1E1P30953 314 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 PTPN9P43378 593 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 OVGP1Q12889 678 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 ASTE1Q2TB18 679 aaPredicted RBP14.69□□□□□ -0.06
CXCL12-208ENST00000496375 TDRD12Q587J7 1177 aaKnown RBP14.69□□□□□ -0.06
CXCL12-208ENST00000496375 C6orf118Q5T5N4 469 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 PLEKHA7Q6IQ23 1121 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 KANSL1Q7Z3B3 1105 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 VPS36Q86VN1 386 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 CHST14Q8NCH0 376 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 OR7D4Q8NG98 312 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 TSC1Q92574 1164 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 KLK6Q92876 244 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 MYOCQ99972 504 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 TNKS2Q9H2K2 1166 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 DYRK4Q9NR20 520 aa14.69□□□□□ -0.06
CXCL12-208ENST00000496375 METTL5Q9NRN9 209 aaKnown RBP14.69□□□□□ -0.06
CXCL12-208ENST00000496375 SEPT11Q9NVA2 429 aaKnown RBP14.69□□□□□ -0.06
CXCL12-208ENST00000496375 SMG1Q96Q15 3661 aaKnown RBP14.69□□□□□ -0.06
CXCL12-208ENST00000496375 IGLV3-10A0A075B6K4 115 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 A0A1W2PQU0 124 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 AKR1B15C9JRZ8 316 aaPredicted RBP14.68□□□□□ -0.06
CXCL12-208ENST00000496375 SDC3O75056 442 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 PRNPP04156 253 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 PLEKP08567 350 aaPredicted RBP14.68□□□□□ -0.06
CXCL12-208ENST00000496375 MYBL1P10243 752 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 CDK4P11802 303 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 JUPP14923 745 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 PRLRP16471 622 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 HNF1BP35680 557 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 CLCN6P51797 869 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 CCDC15Q0P6D6 951 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 ARTNQ5T4W7 220 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 ACBD5Q5T8D3 534 aaPredicted RBP14.68□□□□□ -0.06
CXCL12-208ENST00000496375 C22orf39Q6P5X5 142 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 TMC6Q7Z403 805 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 PDZD3Q86UT5 571 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 FAM131BQ86XD5 332 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 TC2NQ8N9U0 490 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 TMIEQ8NEW7 156 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 GRIN3AQ8TCU5 1115 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 TRIM11Q96F44 468 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 KLHDC7BQ96G42 594 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 CFAP57Q96MR6 1250 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 HAPLN3Q96S86 360 aa14.68□□□□□ -0.06
CXCL12-208ENST00000496375 SPON2Q9BUD6 331 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms