RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 HNRNPKP61978 463 aaKnown RBP eCLIP13.98□□□□□ -0.17
SAMM50-204ENST00000493161 SLC6A3Q01959 620 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 C1QBPQ07021 282 aaKnown RBP13.98□□□□□ -0.17
SAMM50-204ENST00000493161 VAC14Q08AM6 782 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 PERM1Q5SV97 790 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 TRIM65Q6PJ69 517 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 KYAT3Q6YP21 454 aaKnown RBP13.98□□□□□ -0.17
SAMM50-204ENST00000493161 EFL1Q7Z2Z2 1120 aaKnown RBP13.98□□□□□ -0.17
SAMM50-204ENST00000493161 DCAF4L2Q8NA75 395 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 SNRNP27Q8WVK2 155 aaKnown RBP13.98□□□□□ -0.17
SAMM50-204ENST00000493161 WBP1Q96G27 269 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 CCDC114Q96M63 670 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 TIGD1Q96MW7 591 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 SLC46A1Q96NT5 459 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 NPY6RQ99463 290 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 KLF6Q99612 283 aaPredicted RBP13.98□□□□□ -0.17
SAMM50-204ENST00000493161 DUSP23Q9BVJ7 150 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 DPH1Q9BZG8 443 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 TCEAL2Q9H3H9 227 aaPredicted RBP13.98□□□□□ -0.17
SAMM50-204ENST00000493161 WDCPQ9H6R7 721 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 THSD1Q9NS62 852 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 GGT7Q9UJ14 662 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 PNMA8BQ9ULN7 279 aaPredicted RBP13.98□□□□□ -0.17
SAMM50-204ENST00000493161 PCDHGC3Q9UN70 934 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 ENTPD2Q9Y5L3 495 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 FADS3Q9Y5Q0 445 aa13.98□□□□□ -0.17
SAMM50-204ENST00000493161 BICDL2A1A5D9 508 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 GOLGA6L4A6NEF3 574 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 AQP9O43315 295 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 ZMPSTE24O75844 475 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 PNMA6AP0CW24 399 aaPredicted RBP13.97□□□□□ -0.17
SAMM50-204ENST00000493161 C6P13671 934 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 GKP32189 559 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 NOS2P35228 1153 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 DNA2P51530 1060 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 NEK3P51956 506 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 RNASE9P60153 205 aaKnown RBP13.97□□□□□ -0.17
SAMM50-204ENST00000493161 RPS21P63220 83 aaKnown RBP13.97□□□□□ -0.17
SAMM50-204ENST00000493161 SKOR1P84550 965 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 CCDC15Q0P6D6 951 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 EIF2B5Q13144 721 aaKnown RBP13.97□□□□□ -0.17
SAMM50-204ENST00000493161 PDE1CQ14123 709 aaPredicted RBP13.97□□□□□ -0.17
SAMM50-204ENST00000493161 MORC3Q14149 939 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 ZCCHC8Q6NZY4 707 aaKnown RBP13.97□□□□□ -0.17
SAMM50-204ENST00000493161 FOXR1Q6PIV2 292 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 PARS2Q7L3T8 475 aaKnown RBP13.97□□□□□ -0.17
SAMM50-204ENST00000493161 SLC26A9Q7LBE3 791 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 SETD3Q86TU7 594 aaPredicted RBP13.97□□□□□ -0.17
SAMM50-204ENST00000493161 DCP2Q8IU60 420 aaKnown RBP13.97□□□□□ -0.17
SAMM50-204ENST00000493161 RBFAQ8N0V3 343 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 LMX1AQ8TE12 382 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 SHC3Q92529 594 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 TBCBQ99426 244 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 SPON2Q9BUD6 331 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 USP29Q9HBJ7 922 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 ZNF212Q9UDV6 495 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 ITM2BQ9Y287 266 aa13.97□□□□□ -0.17
SAMM50-204ENST00000493161 FCF1Q9Y324 198 aaKnown RBP13.97□□□□□ -0.17
SAMM50-204ENST00000493161 IGLON5A6NGN9 336 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 B8ZZF3 427 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 SRGAP2O75044 1071 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 GCATO75600 419 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 GNA14O95837 355 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 CD160O95971 181 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 JUNDP17535 347 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 ITGB7P26010 798 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 L1CAMP32004 1257 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 SULT1E1P49888 294 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 CLCN6P51797 869 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 ARF5P84085 180 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 C1orf61Q13536 156 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 FOXR2Q6PJQ5 311 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 ENOSF1Q7L5Y1 443 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 SLC47A2Q86VL8 602 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 PARGQ86W56 976 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 ZNF397Q8NF99 534 aaPredicted RBP13.96□□□□□ -0.17
SAMM50-204ENST00000493161 NT5C3BQ969T7 300 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 VOPP1Q96AW1 172 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 PPP1R16AQ96I34 528 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 FEM1CQ96JP0 617 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 C1QTNF2Q9BXJ5 285 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 IPO11Q9UI26 975 aaKnown RBP13.96□□□□□ -0.17
SAMM50-204ENST00000493161 CSNK1G3Q9Y6M4 447 aa13.96□□□□□ -0.17
SAMM50-204ENST00000493161 TRPM6Q9BX84 2022 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 IGLV3-10A0A075B6K4 115 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 EME2A4GXA9 379 aaPredicted RBP13.95□□□□□ -0.18
SAMM50-204ENST00000493161 CAPN8A6NHC0 703 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 CDRT15L2A8MXV6 281 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 K7ENP7 123 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 MUSKO15146 869 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 RBMS1P29558 406 aaKnown RBP13.95□□□□□ -0.18
SAMM50-204ENST00000493161 OR1E1P30953 314 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 CLCN1P35523 988 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 PPP1R2P41236 205 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 ABL2P42684 1182 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 RECQLP46063 649 aaPredicted RBP13.95□□□□□ -0.18
SAMM50-204ENST00000493161 RABIFP47224 123 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 SERPINH1P50454 418 aaKnown RBP13.95□□□□□ -0.18
SAMM50-204ENST00000493161 CCNHP51946 323 aaPredicted RBP13.95□□□□□ -0.18
SAMM50-204ENST00000493161 PDX1P52945 283 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms