RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 MS4A14Q96JA4 679 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 MRGPRX4Q96LA9 322 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM81BQ96LP2 452 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 LRGUKQ96M69 825 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF778Q96MU6 729 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 GDAP1L1Q96MZ0 367 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 SLC46A1Q96NT5 459 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ANKRD27Q96NW4 1050 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 SERPINB12Q96P63 405 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PIGSQ96S52 555 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 KRT12Q99456 494 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 EYA3Q99504 573 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 JPH2Q9BR39 696 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC77Q9BR77 488 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ERP44Q9BS26 406 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 POLR3CQ9BUI4 534 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 QTRT1Q9BXR0 403 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PABPC3Q9H361 631 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PRDM13Q9H4Q3 707 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CXorf56Q9H5V9 222 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC134Q9H6E4 229 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 WDCPQ9H6R7 721 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 WDR26Q9H7D7 661 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 VEZTQ9HBM0 779 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 GLOD4Q9HC38 313 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 NLRC4Q9NPP4 1024 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PPANQ9NQ55 473 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 HOMER2Q9NSB8 354 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 HOMER3Q9NSC5 361 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM207AQ9NSI2 230 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 SIDT1Q9NXL6 827 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 MTMR4Q9NYA4 1195 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 DONSONQ9NYP3 566 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 BCCIPQ9P287 314 aaKnown RBP eCLIP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 TRIM10Q9UDY6 481 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 MTRF1LQ9UGC7 380 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ARMCX3Q9UH62 379 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PCYOX1Q9UHG3 505 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 IP6K2Q9UHH9 426 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 DDX20Q9UHI6 824 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM153AQ9UHL3 310 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 NARFQ9UHQ1 456 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 HDAC9Q9UKV0 1011 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 STX8Q9UNK0 236 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 TFR2Q9UP52 801 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 TBC1D30Q9Y2I9 924 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ZBTB1Q9Y2K1 713 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 TMX2Q9Y320 296 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 LRRC42Q9Y546 428 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PCDHGA9Q9Y5G4 932 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PCDHGA8Q9Y5G5 932 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PCDHGA7Q9Y5G6 932 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PCDHGA6Q9Y5G7 932 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PCDHGA3Q9Y5H0 932 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ALG6Q9Y672 507 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PARP4Q9UKK3 1724 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 MEGF6O75095 1541 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 DISP2A7MBM2 1401 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 BCL9O00512 1426 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 DCCP43146 1447 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 TNS2Q63HR2 1409 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 TAF1P21675 1872 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ADGRA2Q96PE1 1338 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 KDM3AQ9Y4C1 1321 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 BCL9LQ86UU0 1499 aa2.15□□□□□ -2.06
SNRNP40-207ENST00000491106 PXDNQ92626 1479 aa2.15□□□□□ -2.06
SNRNP40-207ENST00000491106 ECM29Q5VYK3 1845 aa2.15□□□□□ -2.06
SNRNP40-207ENST00000491106 FRMD3A2A2Y4 597 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 PP2D1A8MPX8 630 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 VGLL3A8MV65 326 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 MIF4GDA9UHW6 222 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 VWC2LB2RUY7 222 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 PGRMC1O00264 195 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 DNM1LO00429 736 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 NDC80O14777 642 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ZBTB5O15062 677 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ADAMTS3O15072 1205 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 MAPK13O15264 365 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC16A6O15403 523 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC16A3O15427 465 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 PROM1O43490 865 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 RAD51CO43502 376 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 RGS10O43665 173 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 EDIL3O43854 480 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TLR2O60603 784 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 RTN2O75298 545 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 GCATO75600 419 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TCEA3O75764 348 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 AGTP01019 485 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TFRCP02786 760 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 KRT18P05783 430 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 GRPP07492 148 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CELA2AP08217 269 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CYP3A4P08684 503 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 VIL1P09327 827 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 DLDP09622 509 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 NUDT17P0C025 328 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 NPSP0C0P6 89 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ELFN1P0C7U0 828 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms