RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 TRABD2BA6NFA1 517 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 NEMP2A6NFY4 417 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 KPNA3O00505 521 aaPredicted RBP10.58□□□□□ -0.72
TTC28-207ENST00000490475 RRP9O43818 475 aaKnown RBP10.58□□□□□ -0.72
TTC28-207ENST00000490475 BNIP3LO60238 219 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 RTN2O75298 545 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 ADCY5O95622 1261 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 FTLP02792 175 aaPredicted RBP10.58□□□□□ -0.72
TTC28-207ENST00000490475 CALB1P05937 261 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 ALPPL2P10696 532 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 KRT3P12035 628 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 SRCP12931 536 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 VAV1P15498 845 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 CKMT2P17540 419 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 HNRNPA2B1P22626 353 aaKnown RBP10.58□□□□□ -0.72
TTC28-207ENST00000490475 RFC1P35251 1148 aaPredicted RBP10.58□□□□□ -0.72
TTC28-207ENST00000490475 PPP2CBP62714 309 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 PPP2CAP67775 309 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 IL9RQ01113 521 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 C1QBPQ07021 282 aaKnown RBP10.58□□□□□ -0.72
TTC28-207ENST00000490475 CNTN1Q12860 1018 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 CCDC14Q49A88 953 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 GLIPR1L2Q4G1C9 344 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 DHRS13Q6UX07 377 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 MON1BQ7L1V2 547 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 GATAD2AQ86YP4 633 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 PLPP6Q8IY26 295 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 MCOLN2Q8IZK6 566 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 PCDH20Q8N6Y1 951 aaKnown RBP10.58□□□□□ -0.72
TTC28-207ENST00000490475 RXFP2Q8WXD0 754 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 SYN2Q92777 582 aaPredicted RBP10.58□□□□□ -0.72
TTC28-207ENST00000490475 ARHGEF26Q96DR7 871 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 LRIG1Q96JA1 1093 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.58□□□□□ -0.72
TTC28-207ENST00000490475 ZYG11BQ9C0D3 744 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 NRSN2Q9GZP1 204 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 ANLNQ9NQW6 1124 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 TMPRSS4Q9NRS4 437 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 IL36AQ9UHA7 158 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 VPS51Q9UID3 782 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 SARDHQ9UL12 918 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 HPCAL4Q9UM19 191 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 ZFHX4Q86UP3 3567 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 TRPM6Q9BX84 2022 aa10.58□□□□□ -0.72
TTC28-207ENST00000490475 SPEGQ15772 3267 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 A0A087WV48 116 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 TCRBV5S1A1TA0A578 114 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 C2CD4BA6NLJ0 364 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 SIGLEC16A6NMB1 481 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 I6L893 689 aaPredicted RBP10.57□□□□□ -0.72
TTC28-207ENST00000490475 SERPING1P05155 500 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 DESP17661 470 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 RRM1P23921 792 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 ACP1P24666 158 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 MAT2AP31153 395 aaKnown RBP10.57□□□□□ -0.72
TTC28-207ENST00000490475 ACADVLP49748 655 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 NEK3P51956 506 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 ADKP55263 362 aaKnown RBP10.57□□□□□ -0.72
TTC28-207ENST00000490475 ATP11AP98196 1134 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 NRG1Q02297 640 aaPredicted RBP10.57□□□□□ -0.72
TTC28-207ENST00000490475 CYP4F3Q08477 520 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 ZNF211Q13398 564 aaPredicted RBP10.57□□□□□ -0.72
TTC28-207ENST00000490475 CAMK2BQ13554 666 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 C15orf59Q2T9L4 293 aaPredicted RBP10.57□□□□□ -0.72
TTC28-207ENST00000490475 CCDC157Q569K6 752 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 KIAA1161Q6NSJ0 714 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 C22orf39Q6P5X5 142 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 WDR59Q6PJI9 974 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 SARM1Q6SZW1 724 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 ERN2Q76MJ5 926 aaKnown RBP10.57□□□□□ -0.72
TTC28-207ENST00000490475 HORMAD1Q86X24 394 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 EID2Q8N6I1 236 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 TMEM145Q8NBT3 493 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 OR2A12Q8NGT7 310 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 MDM1Q8TC05 714 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 TSC1Q92574 1164 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 RAB7BQ96AH8 199 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 ISG20Q96AZ6 181 aaKnown RBP10.57□□□□□ -0.72
TTC28-207ENST00000490475 IQCDQ96DY2 449 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 FEM1CQ96JP0 617 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 DUSP23Q9BVJ7 150 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 SELENOOQ9BVL4 669 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 USP29Q9HBJ7 922 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 KLHL11Q9NVR0 708 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 DONSONQ9NYP3 566 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 NCKIPSDQ9NZQ3 722 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 SNX10Q9Y5X0 201 aa10.57□□□□□ -0.72
TTC28-207ENST00000490475 BZW2Q9Y6E2 419 aaKnown RBP10.57□□□□□ -0.72
TTC28-207ENST00000490475 ZSCAN5CA6NGD5 496 aaPredicted RBP10.56□□□□□ -0.72
TTC28-207ENST00000490475 A6NNZ2 444 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 CBX4O00257 560 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 RRP8O43159 456 aaKnown RBP10.56□□□□□ -0.72
TTC28-207ENST00000490475 ATMINO43313 823 aaPredicted RBP10.56□□□□□ -0.72
TTC28-207ENST00000490475 AP1G1O43747 822 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 ZNF500O60304 480 aaPredicted RBP10.56□□□□□ -0.72
TTC28-207ENST00000490475 CNTN5O94779 1100 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 ENDOD1O94919 500 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 PCDH8O95206 1070 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 THEGLP0DJG4 465 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 GZMAP12544 262 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms