RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 SEL1L3Q68CR1 1132 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 TRNP1Q6NT89 227 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 FAM183BPQ6ZVS7 135 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 SLC26A9Q7LBE3 791 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 TMC6Q7Z403 805 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 ZNF605Q86T29 641 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 HORMAD1Q86X24 394 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 RNF214Q8ND24 703 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 ZNF248Q8NDW4 579 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 SHC3Q92529 594 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 PGAP3Q96FM1 320 aaPredicted RBP8.33□□□□□ -1.08
SMG5-205ENST00000489907 PPP1R13BQ96KQ4 1090 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 C1orf74Q96LT6 269 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 ZNF578Q96N58 590 aaPredicted RBP8.33□□□□□ -1.08
SMG5-205ENST00000489907 PPP1R9BQ96SB3 815 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 MYOCQ99972 504 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 HDAC8Q9BY41 377 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 CPNE5Q9HCH3 593 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 SIX2Q9NPC8 291 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 NLGN3Q9NZ94 848 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 SLC12A6Q9UHW9 1150 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 SLC25A13Q9UJS0 675 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 HS3ST3A1Q9Y663 406 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 LRP4O75096 1905 aa8.33□□□□□ -1.08
SMG5-205ENST00000489907 SYNJ2BP-COX16A0A087WUM0 186 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 SPTY2D1-AS1A0A0U1RR47 76 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 A0A1B0GTH6 734 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 PMS2P1A4D2B8 440 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 EME2A4GXA9 379 aaPredicted RBP8.32□□□□□ -1.08
SMG5-205ENST00000489907 CDRT15L2A8MXV6 281 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 M0QYT0 321 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 FFAR2O15552 330 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 EFSO43281 561 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 HSF2BPO75031 334 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 USP12O75317 370 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 GNA14O95837 355 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 PAK4O96013 591 aaPredicted RBP8.32□□□□□ -1.08
SMG5-205ENST00000489907 CSF2P04141 144 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 KRT5P13647 590 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 EEF1GP26641 437 aaKnown RBP8.32□□□□□ -1.08
SMG5-205ENST00000489907 ARF5P84085 180 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 SLC6A3Q01959 620 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 CETN1Q12798 172 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 NME3Q13232 169 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 ISXQ2M1V0 245 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 OR6B2Q6IFH4 312 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 TRIM65Q6PJ69 517 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 LINGO4Q6UY18 593 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 DPY19L3Q6ZPD9 716 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 Q6ZSR6 202 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 ERN2Q76MJ5 926 aaKnown RBP8.32□□□□□ -1.08
SMG5-205ENST00000489907 ENOSF1Q7L5Y1 443 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 NAF1Q96HR8 494 aaKnown RBP8.32□□□□□ -1.08
SMG5-205ENST00000489907 SLC46A1Q96NT5 459 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 LENG8Q96PV6 779 aaPredicted RBP8.32□□□□□ -1.08
SMG5-205ENST00000489907 CRACR2AQ9BSW2 395 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 MFRPQ9BY79 579 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 SLC17A9Q9BYT1 436 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 SIK2Q9H0K1 926 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 FAM204AQ9H8W3 233 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 POLR1BQ9H9Y6 1135 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 COX16Q9P0S2 106 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 VPS28Q9UK41 221 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.32□□□□□ -1.08
SMG5-205ENST00000489907 ENTPD2Q9Y5L3 495 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 FADS3Q9Y5Q0 445 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 ACTL7AQ9Y615 435 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 ZNF462Q96JM2 2506 aa8.32□□□□□ -1.08
SMG5-205ENST00000489907 COL6A6A6NMZ7 2263 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 FOXN3O00409 490 aaPredicted RBP8.31□□□□□ -1.08
SMG5-205ENST00000489907 KPNA3O00505 521 aaPredicted RBP8.31□□□□□ -1.08
SMG5-205ENST00000489907 TEX33O43247 280 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 AP1G1O43747 822 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 BNIP3LO60238 219 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 CSO75390 466 aaKnown RBP8.31□□□□□ -1.08
SMG5-205ENST00000489907 DAB1O75553 588 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 LEFTY1O75610 366 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 ENDOD1O94919 500 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 PON1P27169 355 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 AKT2P31751 481 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 L1CAMP32004 1257 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 CDH5P33151 784 aaPredicted RBP8.31□□□□□ -1.08
SMG5-205ENST00000489907 GABRB2P47870 512 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 CLCN6P51797 869 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 PDX1P52945 283 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 COPB1P53618 953 aaKnown RBP8.31□□□□□ -1.08
SMG5-205ENST00000489907 PCBP4P57723 403 aaKnown RBP8.31□□□□□ -1.08
SMG5-205ENST00000489907 PFN3P60673 137 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 GABREP78334 506 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 DAB2P98082 770 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 FANCCQ00597 558 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 EIF2B5Q13144 721 aaKnown RBP8.31□□□□□ -1.08
SMG5-205ENST00000489907 MTA1Q13330 715 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 ARHGAP44Q17R89 818 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 HSP90AA4PQ58FG1 418 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 BRMS1LQ5PSV4 323 aa8.31□□□□□ -1.08
SMG5-205ENST00000489907 KYAT3Q6YP21 454 aaKnown RBP8.31□□□□□ -1.08
SMG5-205ENST00000489907 SETD3Q86TU7 594 aaPredicted RBP8.31□□□□□ -1.08
SMG5-205ENST00000489907 DCP2Q8IU60 420 aaKnown RBP8.31□□□□□ -1.08
SMG5-205ENST00000489907 PASD1Q8IV76 773 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms