RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 TMEM259Q4ZIN3 620 aa20.48■□□□□ 0.87
CACFD1-205ENST00000489519 MANEALQ5VSG8 457 aa20.48■□□□□ 0.87
CACFD1-205ENST00000489519 RWDD4Q6NW29 188 aaKnown RBP20.48■□□□□ 0.87
CACFD1-205ENST00000489519 FBXL19Q6PCT2 694 aa20.48■□□□□ 0.87
CACFD1-205ENST00000489519 RBM43Q6ZSC3 357 aaKnown RBP20.48■□□□□ 0.87
CACFD1-205ENST00000489519 ZSCAN30Q86W11 494 aa20.48■□□□□ 0.87
CACFD1-205ENST00000489519 DCP2Q8IU60 420 aaKnown RBP20.48■□□□□ 0.87
CACFD1-205ENST00000489519 CENPIQ92674 756 aaPredicted RBP20.48■□□□□ 0.87
CACFD1-205ENST00000489519 MYOCQ99972 504 aa20.48■□□□□ 0.87
CACFD1-205ENST00000489519 C11orf70Q9BRQ4 267 aa20.48■□□□□ 0.87
CACFD1-205ENST00000489519 SCUBE2Q9NQ36 999 aa20.48■□□□□ 0.87
CACFD1-205ENST00000489519 HPCAL4Q9UM19 191 aa20.48■□□□□ 0.87
CACFD1-205ENST00000489519 ZFR2Q9UPR6 939 aaKnown RBP20.48■□□□□ 0.87
CACFD1-205ENST00000489519 SIK3Q9Y2K2 1263 aa20.48■□□□□ 0.87
CACFD1-205ENST00000489519 RNF103O00237 685 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 EPHB6O15197 1021 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 SDC3O75056 442 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 ADRB3P13945 408 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 HS1BP3Q53T59 392 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 KIAA1161Q6NSJ0 714 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 C19orf48Q6RUI8 117 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 ABI3BPQ7Z7G0 1075 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 PHLDB2Q86SQ0 1253 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 SLC25A45Q8N413 288 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 JOSD2Q8TAC2 188 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 GPT2Q8TD30 523 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 IFT43Q96FT9 208 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 LRIG1Q96JA1 1093 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 MAGEH1Q9H213 219 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 TMEM248Q9NWD8 314 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 ADAM22Q9P0K1 906 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 HECAQ9UBI9 543 aaPredicted RBP20.47■□□□□ 0.87
CACFD1-205ENST00000489519 HS3ST3A1Q9Y663 406 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 LAMA5O15230 3695 aa20.47■□□□□ 0.87
CACFD1-205ENST00000489519 AP1G1O43747 822 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 PLEKP08567 350 aaPredicted RBP20.46■□□□□ 0.87
CACFD1-205ENST00000489519 DGKAP23743 735 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 ACP1P24666 158 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 ACVRL1P37023 503 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 GSCP56915 257 aaPredicted RBP20.46■□□□□ 0.87
CACFD1-205ENST00000489519 PTP4A2Q12974 167 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 POLD3Q15054 466 aaPredicted RBP20.46■□□□□ 0.87
CACFD1-205ENST00000489519 SYCP1Q15431 976 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 PROX2Q3B8N5 592 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 RAB6CQ53S08 254 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 SEL1L3Q68CR1 1132 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 NLRP14Q86W24 1093 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 PHF13Q86YI8 300 aaPredicted RBP20.46■□□□□ 0.87
CACFD1-205ENST00000489519 CACTIN-AS1Q8N1I8 211 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 NEK11Q8NG66 645 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 OR13H1Q8NG92 308 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 ARHGEF2Q92974 986 aaKnown RBP20.46■□□□□ 0.87
CACFD1-205ENST00000489519 RAB7BQ96AH8 199 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 NXPE2Q96DL1 559 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 TBC1D31Q96DN5 1066 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 PCMTD1Q96MG8 357 aaPredicted RBP20.46■□□□□ 0.87
CACFD1-205ENST00000489519 CALN1Q9BXU9 219 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 SLC17A9Q9BYT1 436 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 RAB6CQ9H0N0 254 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 FZD3Q9NPG1 666 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 ANO10Q9NW15 660 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 DNAI1Q9UI46 699 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 FCF1Q9Y324 198 aaKnown RBP20.46■□□□□ 0.87
CACFD1-205ENST00000489519 FADS3Q9Y5Q0 445 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 CHD5Q8TDI0 1954 aa20.46■□□□□ 0.87
CACFD1-205ENST00000489519 TDRD6O60522 2096 aaKnown RBP20.46■□□□□ 0.87
CACFD1-205ENST00000489519 A6NNZ2 444 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 FAM72CH0Y354 149 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 SIGLEC6O43699 453 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 LRIG2O94898 1065 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 CD160O95971 181 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 CALB1P05937 261 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 RFC1P35251 1148 aaPredicted RBP20.45■□□□□ 0.86
CACFD1-205ENST00000489519 ANP32AP39687 249 aaKnown RBP20.45■□□□□ 0.86
CACFD1-205ENST00000489519 COPB1P53618 953 aaKnown RBP20.45■□□□□ 0.86
CACFD1-205ENST00000489519 HDAC4P56524 1084 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 E2F1Q01094 437 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 TARDBPQ13148 414 aaKnown RBP eCLIP20.45■□□□□ 0.86
CACFD1-205ENST00000489519 HES3Q5TGS1 186 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 FAM72AQ5TYM5 149 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 FAM72DQ6L9T8 149 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 SASS6Q6UVJ0 657 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 Q6ZSR6 202 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 FAM72BQ86X60 149 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 RYBPQ8N488 228 aaPredicted RBP20.45■□□□□ 0.86
CACFD1-205ENST00000489519 C3orf20Q8ND61 904 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 OR4C6Q8NH72 309 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 FAM172AQ8WUF8 416 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 NTAN1Q96AB6 310 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 PCDHB18PQ96TA0 734 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 SELENOOQ9BVL4 669 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 ZDHHC6Q9H6R6 413 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 NDFIP2Q9NV92 336 aa20.45■□□□□ 0.86
CACFD1-205ENST00000489519 LIMA1Q9UHB6 759 aaKnown RBP20.45■□□□□ 0.86
CACFD1-205ENST00000489519 ZSCAN5CA6NGD5 496 aaPredicted RBP20.44■□□□□ 0.86
CACFD1-205ENST00000489519 LRRC10BA6NIK2 292 aa20.44■□□□□ 0.86
CACFD1-205ENST00000489519 SIGLEC16A6NMB1 481 aa20.44■□□□□ 0.86
CACFD1-205ENST00000489519 LGALS16A8MUM7 142 aa20.44■□□□□ 0.86
CACFD1-205ENST00000489519 TRIM38O00635 465 aa20.44■□□□□ 0.86
CACFD1-205ENST00000489519 TSPAN6O43657 245 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms