RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 SRPRAP08240 638 aaKnown RBP9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 HLA-FP30511 346 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 MATKP42679 507 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 YWHAZP63104 245 aaKnown RBP9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 SULT2A1Q06520 285 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 SEMA3BQ13214 749 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 CAMK2GQ13555 558 aaPredicted RBP9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 ARHGAP44Q17R89 818 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 EXOC3L4Q17RC7 722 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 RABGAP1LQ5R372 815 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 PIK3R6Q5UE93 754 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 DCAF12L1Q5VU92 463 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 SND1Q7KZF4 910 aaKnown RBP eCLIP9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 BHLHA9Q7RTU4 235 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 SLC41A1Q8IVJ1 513 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 ARHGEF19Q8IW93 802 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 CARNMT1Q8N4J0 409 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 KDM1BQ8NB78 822 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 MSANTD4Q8NCY6 345 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 LMO3Q8TAP4 145 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 DQX1Q8TE96 717 aaKnown RBP9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 FBF1Q8TES7 1133 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 ZNF606Q8WXB4 792 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 DNASE2BQ8WZ79 361 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 SNX19Q92543 992 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 BTN2A3PQ96KV6 586 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 CEP44Q9C0F1 390 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 TNKS2Q9H2K2 1166 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 CAPN10Q9HC96 672 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 APEX2Q9UBZ4 518 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 CNTN6Q9UQ52 1028 aa9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 APOBEC2Q9Y235 224 aaKnown RBP9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 TPRP12270 2363 aaKnown RBP9.13□□□□□ -0.95
TNRC6B-208ENST00000489500 TARSL2A2RTX5 802 aaKnown RBP9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 PES1O00541 588 aaKnown RBP9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 DFNA5O60443 496 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 MOCS2O96007 188 aaPredicted RBP9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 PRKCHP24723 683 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 CCR1P32246 355 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 GPD2P43304 727 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 AFF3P51826 1226 aaKnown RBP9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 SIM1P81133 766 aaPredicted RBP9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 CCDC15Q0P6D6 951 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 CAMK4Q16566 473 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 INAVAQ3KP66 663 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 SLC45A4Q5BKX6 768 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 ACBD5Q5T8D3 534 aaPredicted RBP9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 RFWD3Q6PCD5 774 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 TRIM65Q6PJ69 517 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 USP30Q70CQ3 517 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 ADAT2Q7Z6V5 191 aaKnown RBP9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 KIAA0907Q7Z7F0 614 aaPredicted RBP9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 DSG4Q86SJ6 1040 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 TMEM110Q86TL2 294 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 FAM124AQ86V42 546 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 CHSY1Q86X52 802 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 ZDHHC17Q8IUH5 632 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 LRRN4CLQ8ND94 238 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 CYB5D2Q8WUJ1 264 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 SORCS1Q8WY21 1168 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 KAT5Q92993 513 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 OMDQ99983 421 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 MKRN2Q9H000 416 aaKnown RBP9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 SLC6A17Q9H1V8 727 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 TMEM245Q9H330 911 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 FAM204AQ9H8W3 233 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 CD248Q9HCU0 757 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 ASNSD1Q9NWL6 643 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 RRN3Q9NYV6 651 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 PPM1HQ9ULR3 514 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 NAALADL1Q9UQQ1 740 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 PCDH15Q96QU1 1955 aa9.12□□□□□ -0.95
TNRC6B-208ENST00000489500 DNAH14Q0VDD8 3507 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 NCOR2Q9Y618 2525 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 EDDM13A0A1B0GTR0 161 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 GOLGA6L7A0A1B0GV03 622 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 LRRC72A6NJI9 287 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 E5RJQ4 531 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 GIPC1O14908 333 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 HSF2BPO75031 334 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 LUC7L3O95232 432 aaKnown RBP9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 SEMA4FO95754 770 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 TRUB2O95900 331 aaKnown RBP9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 PROS1P07225 676 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 CELA3AP09093 270 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 ZNF883P0CG24 379 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 HLA-EP13747 358 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 CD70P32970 193 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 RPL34P49207 117 aaKnown RBP9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 COPAP53621 1224 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 C21orf59P57076 290 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 ECT2LQ008S8 904 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 MAN2A1Q16706 1144 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 DCAF6Q58WW2 860 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 MS4A13Q5J8X5 152 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 CT47A1Q5JQC4 288 aaPredicted RBP9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 DENND1BQ6P3S1 775 aa9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 C11orf57Q6ZUT1 292 aaPredicted RBP9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 ATG4DQ86TL0 474 aaPredicted RBP9.11□□□□□ -0.95
TNRC6B-208ENST00000489500 ADIPOR2Q86V24 386 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms