RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 PPP1R9BQ96SB3 815 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 CLPBQ9H078 707 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 CYP4F12Q9HCS2 524 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 ABCC13Q9NSE7 274 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 SLC39A1Q9NY26 324 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 APPL1Q9UKG1 709 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 TLK1Q9UKI8 766 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 B3GALT1Q9Y5Z6 326 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 HGSO14964 777 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-233ENST00000489352 INPP4BO15327 924 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 EIF3DO15371 548 aaKnown RBP eCLIP11.79□□□□□ -0.52
HDAC6-233ENST00000489352 FGF3P11487 239 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-233ENST00000489352 GLB1P16278 677 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 CSTF2P33240 577 aaKnown RBP eCLIP11.79□□□□□ -0.52
HDAC6-233ENST00000489352 CYP2J2P51589 502 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 AP3M2P53677 418 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 CENPCQ03188 943 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 TMEM259Q4ZIN3 620 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 ATP1A1-AS1Q5TC04 95 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 MCTP1Q6DN14 999 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 Q6ZVU0 165 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 ERN2Q76MJ5 926 aaKnown RBP11.79□□□□□ -0.52
HDAC6-233ENST00000489352 SV2BQ7L1I2 683 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 SLITRK4Q8IW52 837 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 UNC5BQ8IZJ1 945 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 PPP1R16AQ96I34 528 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 DDA1Q9BW61 102 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 SLAMF7Q9NQ25 335 aa11.79□□□□□ -0.52
HDAC6-233ENST00000489352 CHD5Q8TDI0 1954 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 LOC101059948A0A1B0GTJ6 334 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 RAD51BO15315 384 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 CPNE6O95741 557 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 PRNPP04156 253 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 PNLIPP16233 465 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 CHRNA3P32297 505 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 TBX4P57082 545 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 ARHGAP44Q17R89 818 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 NADK2Q4G0N4 442 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 CRTC2Q53ET0 693 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-233ENST00000489352 ZRANB3Q5FWF4 1079 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 BSPRYQ5W0U4 402 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 RD3Q7Z3Z2 195 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 GDF7Q7Z4P5 450 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 SPRED1Q7Z699 444 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 SKAP1Q86WV1 359 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 XXYLT1Q8NBI6 393 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 NDRG1Q92597 394 aaKnown RBP11.78□□□□□ -0.52
HDAC6-233ENST00000489352 AZIN2Q96A70 460 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 LURAP1Q96LR2 239 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 PRICKLE1Q96MT3 831 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-233ENST00000489352 LENG8Q96PV6 779 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-233ENST00000489352 ULBP1Q9BZM6 244 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 UBXN6Q9BZV1 441 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 RDH14Q9HBH5 336 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 LRRC4Q9HBW1 653 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 PANK4Q9NVE7 773 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 RRN3Q9NYV6 651 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 LRIT1Q9P2V4 623 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 POLHQ9Y253 713 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 PCSK5Q92824 1860 aa11.78□□□□□ -0.52
HDAC6-233ENST00000489352 NEMP1O14524 444 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 SPTLC2O15270 562 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 CELA2BP08218 269 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-233ENST00000489352 PDGFRAP16234 1089 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 MAN1A1P33908 653 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 ARSDP51689 593 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 PGDP52209 483 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 RAB15P59190 212 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 YPEL5P62699 121 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 ABHD18Q0P651 414 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 AMZ1Q400G9 498 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 MS4A13Q5J8X5 152 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 TPRG1LQ5T0D9 272 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 PM20D1Q6GTS8 502 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 PIGZQ86VD9 579 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 ZSCAN30Q86W11 494 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 FAM129CQ86XR2 697 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 HID1Q8IV36 788 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 AGBL5Q8NDL9 886 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 TMIEQ8NEW7 156 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 PMEPA1Q969W9 287 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 TEFMQ96QE5 360 aaKnown RBP11.77□□□□□ -0.53
HDAC6-233ENST00000489352 MFRPQ9BY79 579 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 EDEM3Q9BZQ6 932 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 TRIT1Q9H3H1 467 aaKnown RBP11.77□□□□□ -0.53
HDAC6-233ENST00000489352 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.77□□□□□ -0.53
HDAC6-233ENST00000489352 CCDC39Q9UFE4 941 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 PILRAQ9UKJ1 303 aa11.77□□□□□ -0.53
HDAC6-233ENST00000489352 OAS3Q9Y6K5 1087 aaKnown RBP11.77□□□□□ -0.53
HDAC6-233ENST00000489352 DNHD1Q96M86 4753 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 PRSS44E7EML9 344 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 ATP9BO43861 1147 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 LRCH4O75427 683 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 NADKO95544 446 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-233ENST00000489352 CD58P19256 250 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 LONP1P36776 959 aaKnown RBP11.76□□□□□ -0.53
HDAC6-233ENST00000489352 NEK3P51956 506 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 PER3P56645 1201 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 PFN3P60673 137 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 HMGN5P82970 282 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms